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Table 2 Total of individuals sampled and frequencies, nucleotide diversity and gene diversity for M1 and M1a clusters. a) local, b)Jew and c) total individuals.

From: Mitochondrial lineage M1 traces an early human backflow to Africa

a)

Locals

        

namea

sample

nM1b

%M1

pi*1000

h(%)

nM1a

%M1a

pi*1000

h(%)

Europe

         

IPE

5007

34

0.7

5.6 ± 3.8

84 ± 3

10

29

1.4 ± 1.7

38 ± 18

MEU

3278

15

0.5

5.5 ± 3.9

76 ± 10

9

60

3.0 ± 2.7

42 ± 19

REU

10735

1

0.0

-

-

1

100

-

-

TEU

19020

50

0.3

5.8 ± 3.9

84 ± 3

20

40

2.5 ± 2.2

45 ± 14

Africa

         

NWA

1175

38

3.2

3.9 ± 2.9

70 ± 7

2

5

0.0 ± 0.0

0 ± 0

CWA

2351

7

0.3

7.2 ± 5.3

86 ± 14

1

14

-

-

NEA

288

23

8.0

5.7 ± 3.9

85 ± 5

13

57

4.9 ± 3.7

78 ± 10

ETH

344

53(78)

15.4

9.4 ± 5.6

92 ± 2

45

58

5.5 ± 3.7

82 ± 5

CEA

533

61(86)

11.4

9.1 ± 5.5

92 ± 2

48

56

5.4 ± 3.7

81 ± 5

WA

3526

45

1.3

4.5 ± 3.2

75 ± 6

3

7

0.0 ± 0.0

0 ± 0

EA

821

84(109)

10.2

8.5 ± 5.2

92 ± 2

61

56

5.5 ± 3.7

81 ± 5

SEA

4347

129(154)

3.0

7.9 ± 4.9

91 ± 1

64

42

5.2 ± 3.6

79 ± 5

Asia

         

WAS

7589

36(28)

0.5

5.5 ± 3.8

78 ± 8

18

64

2.8 ± 2.4

49 ± 14

Total

         

TOT

30956

215(232)

0.7

7.2 ± 4.5

89 ± 1

102

44

4.4 ± 3.1

69 ± 5

EAs

5912

0

0.0

-

-

-

-

-

-

SAf

596

0

0.0

-

-

-

-

-

-

b)

Jews

        

namea

sample

nM1b

%M1

pi*1000

h(%)

nM1a

%M1a

pi*1000

h(%)

Europe

         

JIP

48

2

4.2

3.6 ± 5.1

100 ± 50

2

100

3.6 ± 5.1

100 ± 50

JRE

663

6

0.9

0.0 ± 0.0

0 ± 0

6

100

0.0 ± 0.0

0 ± 0

JTE

711

8

1.1

2.5 ± 2.4

46 ± 20

8

100

2.5 ± 2.4

46 ± 20

Africa

         

JNWA

135

0

0.0

-

-

-

-

-

-

JNEA

20

0

0.0

-

-

-

-

-

-

JET

69

14

20.3

5.7 ± 4.0

81 ± 7

12

86

3.8 ± 3.1

76 ± 8

JCEA

69

14

20.3

  

12

86

  

JEA

89

14

15.7

  

12

86

  

JSEA

224

14

6.3

  

12

86

  

Asia

         

JAS

473

7

1.5

0.0 ± 0.0

0 ± 0

7

100

0.0 ± 0.0

0 ± 0

Total

         

JEW

1408

29

2.1

6.3 ± 4.2

86 ± 3

27

93

5.6 ± 3.8

84 ± 3

c)

Totals

        

namea

sample

nM1b

%M1

pi*1000

h(%)

nM1a

%M1a

pi*1000

h(%)

Europe

         

IPEj

5055

36

0.7

5.7 ± 3.8

84 ± 3

12

33

1.7 ± 1.8

44 ± 16

REUj

11398

7

0.1

2.1 ± 2.2

29 ± 20

7

100

2.1 ± 2.2

29 ± 20

TEUj

19731

58

0.3

6.2 ± 4.1

86 ± 3

28

48

3.3 ± 2.6

64 ± 9

Africa

         

NWA

1310

38

2.9

  

2

5

  

NEA

308

23

7.5

  

13

57

  

ETHj

413

67(92)

16.2

9.1 ± 5.5

92 ± 2

57

62

5.4 ± 3.6

82 ± 4

CEAj

602

75 (100)

12.5

8.9 ± 5.4

92 ± 2

60

60

5.3 ± 3.6

81 ± 4

EAj

910

98(123)

10.8

8.4 ± 5.1

92 ± 2

73

59

5.4 ± 3.7

82 ± 4

SEAj

4571

143(168)

3.1

8.0 ± 4.9

92 ± 1

78

45

5.5 ± 3.7

81 ± 4

Asia

         

WASj

8062

43(35)

0.5

5.7 ± 3.9

82 ± 5

25

71

3.6 ± 2.3

67 ± 9

Total

         

TOTj

32364

244(261)

0.8

7.4 ± 4.6

90 ± 1

129

49

4.8 ± 3.3

77 ± 4

  1. a Name for locals, Jews and total for different areas: Europe: Iberian Peninsula and related Islands (IPE, JIP, IPEj), Europe Mediterranean area (MEU), Rest of Europe (REU, JRE, REUj), and total Europe (TEU, JTE, TEUj); Africa: Northwest Africa (NWA, JNWA), Central West Africa (CWA), Northeast Africa (NEA, JNEA), Ethiopia (ETH, JET, ETHj), Central East Africa (CEA, JCEA, CEAj), East Africa (EA, JEA, EAj), West Africa (WA) and Supra-Equatorial Africa (SEA, JSEA, SEAj); Asia: West Asia (WAS, JAS, WASj); Total of these samples (without South Africa and East Asia) (TOT, JEW, TOTj); East Asia (EAs); South Africa (SAf).
  2. b Number outside and inside the parenthesis were used to estimate the M1 and M1a frequency, respectively.
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BMC Genomics

ISSN: 1471-2164

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