EuMicroSatdb: A database for microsatellites in the sequenced genomes of eukaryotes

Aishwarya, Veenu; Grover, Atul; Sharma, Prakash C

doi:10.1186/1471-2164-8-225

BMC Genomics

Table 2 Details of genomes included in EuMicroSatdb

From: EuMicroSatdb: A database for microsatellites in the sequenced genomes of eukaryotes

Species	Build/Assembly/Ver.	Source	Web Link
Saccharomyces cerevisiae	SGD 1, Nov 2005	Ensembl	http://www.ensembl.org
Schizosaccharomyces pombe	NCBI release	NCBI	ftp://ftp.ncbi.nlm.nih.gov
Aspergillus oryzae RIB40	NCBI release	NCBI	ftp://ftp.ncbi.nlm.nih.gov
Aspergillus fumigatus	NCBI release	NCBI	ftp://ftp.ncbi.nlm.nih.gov
Cryptococcus neoformans varJEC21	NCBI release	NCBI	ftp://ftp.ncbi.nlm.nih.gov
Encephalitozoon cuniculi	NCBI release	NCBI	ftp://ftp.ncbi.nlm.nih.gov
Eremothecium gossypii	NCBI release	NCBI	ftp://ftp.ncbi.nlm.nih.gov
Candida glabrata CBS138	Genolevures 2 Release 2, May 2006	Genolevures	http://cbi.labri.u-bordeaux.fr
Debaryomyces hansenii	Genolevures 2 Release 2, May 2006	Genolevures	http://cbi.labri.u-bordeaux.fr
Kluyveromyces lactis	Genolevures 2 Release 2, May 2006	Genolevures	http://cbi.labri.u-bordeaux.fr
Yarrowia lipolytica	Genolevures 2 Release 2, May 2006	Genolevures	http://cbi.labri.u-bordeaux.fr
Caenorhabditis elegans	WS160, July 2006	Ensembl	http://www.ensembl.org
Plasmodium falciparum	NCBI release	NCBI	ftp://ftp.ncbi.nlm.nih.gov
Anopheles gambiae	AgamP3, Feb 2006	Ensembl	http://www.ensembl.org
Drosophila melanogaster	BDGP 4.3, July 2005	Ensembl	http://www.ensembl.org
Apis mellifera	NCBI release	NCBI	ftp://ftp.ncbi.nlm.nih.gov
Tribolium castaneum	NCBI release	NCBI	ftp://ftp.ncbi.nlm.nih.gov
Oryza sativa ssp.japonica	Build 4.0	IRGSP	http://rgp.dna.affrc.go.jp/IRGSP/
Oryza sativa ssp. indica	2003-08-01 BGI	BGI	http://rise.genomics.org.cn
Arabidopsis thaliana	ver. Jan 22 2004	TAIR	http://www.arabidopsis.org
Ciona intestinalis	JGI 2, Mar 2005	Ensembl	http://www.ensembl.org
Tetraodon nigroviridis	TETRAODON 7, Apr 2003	Ensembl	http://www.ensembl.org
Danio rerio	Zv6, Mar 2006	Ensembl	http://www.ensembl.org
Rattus norvegicus	RGSC 3.4, Dec 2004	Ensembl	http://www.ensembl.org
Mus musculus	NCBI m36, Dec 2005	Ensembl	http://www.ensembl.org
Gallus gallus	WASHU2, May 2006	Ensembl	http://www.ensembl.org
Canis familiaris	CanFam 1.0, July 2004	Ensembl	http://www.ensembl.org
Macaca mulatta	MMUL 1.0, Feb 2006	Ensembl	http://www.ensembl.org
Bos taurus	Btau_3.1, Aug 2006	Ensembl	http://www.ensembl.org
Pan troglodytes	PanTro 2.1, Mar 2006	Ensembl	http://www.ensembl.org
Homo sapiens	NCBI 36, Oct 2005	Ensembl	http://www.ensembl.org

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ISSN: 1471-2164

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