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Table 3 Alu-DR2 elements within ENCODE ChIP-on-chip RARα binding regions.

From: Widespread Alu repeat-driven expansion of consensus DR2 retinoic acid response elements during primate evolution

DR2 position

RARα binding region

region length

DR2 position in region

nearest gene

distance (kb)

chr11:5234577–5234590

chr11:5234153–5234769

617

437

HBG2

-2.0

chr11:116438036–116438049

chr11:116437268–116438894

1627

768

KIAA0999

36.1

chr11:5214973–5214986

chr11:5214632–5215086

455

354

HBD

-2.5

chr15:41723046–41723059

chr15:41722559–41723965

1407

500

CATSPER2

5.2

chr15:41832787–41832800

chr15:41832276–41832882

607

524

PDIA3

6.9

chr15:41893221–41893234

chr15:41892245–41893398

1154

989

MFAP1

11.0

chr19:59507050–59507063

chr19:59506478–59507251

774

572

LILRA5

9.1

chr20:33783677–33783690

chr20:33783609–33783958

350

68

RBM39 (RNPC2)

9.9

chr20:33795208–33795221

chr20:33795121–33795786

666

87

RBM39 (RNPC2)

-1.6

chr21:33890599–33890612

chr21:33890070–33890930

861

529

DONSON

-7.7

chr21:39545848–39545861

chr21:39545687–39546093

407

161

BRWD1

61.5

chr22:30446428–30446441

chr22:30446058–30446529

472

383

C22orf30 (MGC50372)

-13.1

chr6:74021882–74021895

chr6:74021526–74021987

462

369

C6orf148

7.7

chr6:108492975–108492988

chr6:108492625–108493122

498

363

OSTM1

9.6

chr7:115763054–115763067

chr7:115762699–115763680

982

368

CAV1

4.2

chr7:116952987–116953000

chr7:116952795–116953258

464

192

CTTNBP2

154.5

chrX:122568351–122568364

chrX:122567587–122568522

936

777

THOC2

-12.1