Fungal CSL transcription factors

BMC Genomics

Table 1 Fungal CSL proteins

Organism	Protein	Accession number/Locus^a	Length (aa)	Status^b	Nuclear^c	Source
Ascomycota: Taphrinomycotina
*Schizosaccharomyces pombe*	SPCC1223.13	CAA20882	963	Exp^d	+++	[40]
	SPCC736.08	NP_587779	613	Exp^d	-	[40]
*Schizosaccharomyces japonicus*	SjCSL2	Supercontig 4 (bases 1104530–1107169)	879	Hyp	+++	[31]^e
	SjCSL1	Supercontig 5 (bases 726033–727712)	559	Hyp	+++	[31]^e
Zygomycota
*Rhizopus oryzae*	RO3G_06481	RO3G_06481.1	694	Hyp	+++	[51]
	RO3G_07636	RO3G_07636.1	662	Hyp	++	[51]^e
	RO3G_11583	RO3G_11583.1	764	Hyp	+++	[51]^e
	RO3G_14587	RO3G_14587.1	886	Hyp	+++	[51]^e
	RO3G_06953	RO3G_06953.1	449	Hyp	+++	[51]
	RO3G_08863	RO3G_08863.1	482	Hyp	+++	[51]
	RO3G_13784	RO3G_13784.1	478	Hyp	+++	[51]
Basidiomycota
*Coprinus cinereus*	CC1G_03194	EAU91026	960	Hyp	+++	[40]
	CC1G_01706	CC1G_01706.1	803	Hyp	+	[52]^e
*Cryptococcus neoformans*	CNBD3370	EAL21283	1015	Hyp	+++	[40]
	CNA01890	AAW40742	776	Exp	+++	[40]
*Phanerochaete chrysosporium*	PcCSL2	Scaffold 6 Contig 19 (bases 50978–54385)	1012	Hyp	++	[53]^e
	Pc6518	protein id "6518"	960	Hyp	++	[53]
*Ustilago maydis*	UM06280	EAK82808	1482	Hyp	+++	[40]
	UM05862	EAK86807	1094	Hyp	+++	[40]

Notes: ^arefers to the respective database stated in the 'Source' column; ^bExp – expressed protein, Hyp – hypothetical protein; ^cnuclear localization prediction score (see Methods); ^dMP et al., manuscript in preparation; ^esee Additional files 1 and 2 for new sequence predictions and corrections made to the original database sequences.

ISSN: 1471-2164