Parameter | Description | Value |
---|---|---|
N | Number of case (control) subjects | 1000, 2000, 5000, 10000 |
φ | Prevalence of the disease | 0.01, 0.1 |
T | Size of the pool | 25, 50, 100, 250, 500 |
K | Number of replicates of each pool | 1, 2, 4, 8 |
p d | Disease allele frequency | 0.1, 0.25 |
MOI | Modes of inheritance | dominant, recessive, multiplicative |
R 2 | Genotype relative risk of homozygote of disease allele | *1.2, 1.5, 2.25, 4 |
q 1 | Minor SNP marker allele frequency | 0.1, 0.35 |
M | Machine replicability variance factor | 2.05, 2.1, 2.25, 3 |