The functional modulation of epigenetic regulators by alternative splicing

BMC Genomics

Table 7 Templates utilised for comparative modelling

Protein name	Size Ref.	Species	Domain name	PDB code	% Seq. Id.
cbp-1	2056	C.e.	ZNF_TAZ	1L8C	75
SMARCA1 (SNF2L)	1054	H.s.	DEXHC	1Z6A	38
SMARCA2 (BRM)	1590	H.s.	BROMO	1N72	26
SUV39H2	410	H.s.	CHROMO	1KNA	47
SUV39H2	410	H.s.	SET	1MVH	39
UBE2A	154	H.s.	UBCC	1JAS	95
PRKDC (DNA-PK)	4127	H.s.	PI3-PI4 KINASE	1E8Y	29

In the "Species" column H.s. and C.e., mean Homo sapiens and Caenorhabditis elegans, respectively. The size of the whole protein is given in amino acid number. % Seq.Id. is the percentage of sequence identity between the target and the template sequences. The PDB code is the code of the template structure utilised for the comparative modelling in the PDB database [64].

ISSN: 1471-2164