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Table 4 Performances of RScan with different k and match-core

From: RScan: fast searching structural similarities for structured RNAs in large databases

k match-core # of True Hits/TP/FN/FP Thash (s) Tsearch (s) Time (s)
7 14 20 32/18/2/14 8 824 832
9 18   15/11/9/4 4 60 64
11 22   11/10/10/1 17 6 23
7 211   11/10/10/1 8 18 26
  1. 1This match-core is 3 times of k here and other match-cores are 2 times of corresponding k.