From: MELOGEN: an EST database for melon functional genomics
Dinucleotide repeat | Number of di-pSSR | % |
---|---|---|
AG | 205 | 83.3 |
AT | 23 | 9.4 |
AC | 18 | 7.3 |
Total | 246 | 100 |
Trinucleotide repeat | Number of tri-pSSR | % |
AAC | 41 | 5.7 |
AAG | 471 | 66.0 |
AAT | 22 | 3.1 |
ACC | 18 | 2.5 |
ACG | 14 | 2.0 |
ACT | 4 | 0.6 |
AGC | 25 | 3.5 |
AGG | 54 | 7.6 |
ATC | 48 | 6.6 |
CCG | 17 | 2.4 |
Total | 714 | 100 |
Tetranucleotide repeat | Number of tetra-pSSR | % |
AAAC | 8 | 8.7 |
AAGG | 7 | 7.6 |
AATC | 4 | 4.3 |
AATG | 3 | 3.3 |
AATT | 2 | 2.2 |
ATCG | 2 | 2.2 |
ACTC | 1 | 1.1 |
AAGC | 1 | 1.1 |
ACAT | 1 | 1.1 |
AAAG | 47 | 51.1 |
AAAT | 16 | 17.3 |
Total | 92 | 100 |