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Table 4 Simple sequence repeats (SSRs) statistics*

From: MELOGEN: an EST database for melon functional genomics

Dinucleotide repeat

Number of di-pSSR

%

AG

205

83.3

AT

23

9.4

AC

18

7.3

Total

246

100

Trinucleotide repeat

Number of tri-pSSR

%

AAC

41

5.7

AAG

471

66.0

AAT

22

3.1

ACC

18

2.5

ACG

14

2.0

ACT

4

0.6

AGC

25

3.5

AGG

54

7.6

ATC

48

6.6

CCG

17

2.4

Total

714

100

Tetranucleotide repeat

Number of tetra-pSSR

%

AAAC

8

8.7

AAGG

7

7.6

AATC

4

4.3

AATG

3

3.3

AATT

2

2.2

ATCG

2

2.2

ACTC

1

1.1

AAGC

1

1.1

ACAT

1

1.1

AAAG

47

51.1

AAAT

16

17.3

Total

92

100

  1. *The number of di-, tri- and tetranucleotide repeats identified in the melon database is shown for the complete set of putative SSRs (pSSRs).