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Table 7 Functional annotation statistics

From: MELOGEN: an EST database for melon functional genomics

A. Number of unigenes with BLAST hits

Database*

Number of unigenes

%

Arabidopsis

11,724

70.5

Cucurbitaceae

5,340

32.1

Uniref90

11,893

71.5

Any database

13,019

78.3

B. Number of unigenes with HMMER hits

  

Database*

Number of unigenes

%

Pfam

4,655

28.0

C. Number of unigenes with orthologue

  

Database*

Number of unigenes

%

Arabidopsis

6,673

40.1

  1. * Databases searched were: Arabidopsis [6,109]; Uniref90 [110,115]; Cucurbitaceae: all cucurbitaceae sequences available in the National Center for Biotechnology Information (NCBI); any database: results using Arabidopsis, cucurbitaceae and Uniref90 databases all together; Pfam [49,112].