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Table 9 Transcripts selected from the database for gene expression analysis by Real Time qPCR

From: MELOGEN: an EST database for melon functional genomics

Gene Melogen unigene Sequence length (bp) Arabidopsis locus Aminoacid similarity (%) Annotation (HMMR domain)
CTL1 bCL1465Contig1 1,387 AT1G05850 66.8 Chitinase-like protein 1, similar to class I chitinase (Glyco_hydro_19)
CYP 7 bCL3337Contig1 801 AT5G58710 78.4 Peptidyl-prolyl cis-trans isomerase, cyclophilin
EIF4A-2 bCL2906Contig1 1,146 AT1G54270 92.6 Eukaryotic translation initiation factor 4A-2 (DEAD)
EIF4E bCL4710Contig1 815 AT4G18040 77.5 Eukaryotic translation initiation factor 4E 1 (IF4E)
EIN4 bCL1742Contig1 829 AT3G04580 55.7 Ethylene receptor (Response_reg)
GA2OX1 bCL1313Contig1 1,454 AT1G78440 59.9 Gibberellin 2-oxidase (2OG-FeII_Oxy)
HSP101 bCI_38-F11-M13R_c 726 AT1G74310 73.4 Heat shock protein 101 (AAA_2)
HSP70 bPSI_41-D06-M13R_c 819 AT5G09590 86.8 Heat shock protein 70/HSC70-5 (HSP70)
IAA9 bCL1341Contig1 1,672 AT5G65670 51.2 Auxin-responsive protein/indoleacetic acid- induced protein 9 (AUX_IAA)
LSM1 bHS_37-F11-M13R_c 766 AT3G14080 72.4 Small nuclear ribonucleoprotein/snRNP, putative/Sm protein, putative, similar to U6 snRNA-associated Sm-like protein
LUT2 bCL3563Contig1 1,082 AT5G57030 75.5 Lycopene epsilon cyclase (Lycopene_cycl)
NCBP bCL183Contig1 1,081 AT5G18110 85.3 Novel cap-binding protein (IF4E)
SVP bCL2852Contig1 826 AT2G22540 54.9 Short vegetative phase protein, MADS box transcription factor related cluster (SRF-TF)
HIR bCL144Contig1 1,266 AT1G69840 89.7 Band 7 family protein, strong similarity to hypersensitive-induced response protein (Band_7)
TCH4 bCL1212Contig1 1,228 AT5G57560 65.9 Xyloglucan:xyloglucosyl transferase/xyloglucan endotransglycosylase/endo- xyloglucan transferase/TCH4
TIP4 bA_23-B12-M13R_c 751 AT2G25810 50.5 Tonoplast intrinsic protein (MIP)
TOM1 bCL4416Contig1 780 AT4G21790 75.4 Transmembrane protein-related/TOM1 (DUF1084)
TOM2A bCL3115Contig1 1,113 AT1G32400 60.1 Senescence-associated family protein
TOM3 bPSI_36-E03-M13R_c 857 AT1G14530   Tobamovirus multiplication protein 3/THH1 (DUF1084)
UGE5 bCL1153Contig1 1,313 AT4G10960 70.9 UDP-glucose 4-epimerase/UDP-galactose 4- epimerase/Galactowaldenase (Epimerase)
WRKY70 bA_25-B01-M13R_c 889 AT3G56400 42.1 WRKY family transcription factor, DNA-binding protein (WRKY)