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Table 1 Summary of Citrus EST libraries

From: Analysis of 13000 unique Citrus clusters associated with fruit quality, production and salinity tolerance

Species

Library

Library description

Type

ESTsa

Exclusive unigenesb

C. clementina

AbsAOv1

Abscission zone A and surrounding tissues of ethylene-treated ovary explants

Standard

900

229

 

AbsCOv1

Abscission zone C and surrounding tissues of ethylene-treated ovary explants

Standard

947

240

 

AbsDev

Laminar abscission zone and surrounding tissues (petiole and blade) of developing leaves

Standard

877

258

 

FruitTF

Flavedo and juice vesicles from fruits at different developmental stages

Standard

3999

1263

 

PhII-IIIVesicles1

Juice vesicles from fruits at phases II and III

Standard

1020

70

 

NFL

Organs and tissues at different stages. Plants under normal culture practices or subjected to biotic and abiotic stresses

Normalized Full length

41288

8440

C. sinensis

AbsCFruit1

Abscission zone C and surrounding tissues of mature fruits

Standard

783

218

 

LSH

Leaves from prolonged salt-treated plants

Standard

1009

340

C. reshni

KCl-Salt1

Roots subjected salinity (Cl-) treatments

Standard

960

253

Citrus sinensis × Poncirus trifoliata

EHR

Roots subjected to water stress and re-hydration

Standard

849

121

   

Total

52632

11432

  1. a Total number of ESTs assembled
  2. b Unigenes (singletons and contigs) from a single library