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Table 5 Lignin Biosynthesis Pathway

From: Analysis of 13000 unique Citrus clusters associated with fruit quality, production and salinity tolerance

Enzymatic Activity Reaction EC Gene Name Citrus Unigenesa Phyl. Anal.b ESTs
4-coumarate coenzyme A ligase 6.2.1.12 At1g51680 1 1 4
   At1g62940 1 1 5
   At1g65060 1 (1) 1 7
   At3g21240 1 (1) 1 9
   At4g05160 1 1 1
   At5g63380 3 (1) 3 13
   At1g20510 1 1 5
  Total 7   9  
5-hydroxy coniferaldehyde o-methyltransferase 2.1.1.68 At5g54160 5 (1) 5 41
caffeoyl-CoA O-methyltransferase 2.1.1.104 At4g34050 3 2 14
cinnamoyl-CoA reductase 1.2.1.44 At1g80820 1 1 2
   At2g23910 1 1 10
   At4g30470 1 1 7
   At5g14700 1 1 10
  Total 4   4  
cinnamyl-alcohol dehydrogenase 1.1.1.195 At1g09490 1 1 1
   At1g51410 1 1 2
   At4g27250 1 1 1
   At5g19440 2 (1) 2 1
   At3g19450 1 1 6
   At4g34230 1 1 1
  Total 6   7  
coniferyl aldehyde 5-hydroxylase NIL At4g36220 3 (2) 3 15
coumarate 3-hydroxylase 1.14.13.36 At2g40890 2 2 25
feruloyl coenzyme A reductase 1.2.1.44 At1g15950 2 2 32
UDP-glucose 4-epimerase 1.2.1.44 At2g02400 2 2 17
   At2g33590 1 1 13
   At5g58490 1 1 62
  Total 3   4  
  1. a Number Citrus unigenes annotated assigned to the enzymatic activty
  2. b Nimber of Unigenes that clustered with the Arabidpopsis proteins asociated with the enzymatic activity, in the phlyogenetic analysis.