From: Comparison of protein coding gene contents of the fungal phyla Pezizomycotina and Saccharomycotina
Phylum | Subphylum | Name | Abbreviation | Count of ORFs | Source | WWW | Funcat | InterPro | Protfun |
---|---|---|---|---|---|---|---|---|---|
Ascomycota | Archeascomycota | Schizosaccharomyces pombe | Spom | 4984 | Sanger Institute, UK | http://www.sanger.ac.uk/Projects/S_pombe/ | YES | ||
Ascomycota | Pezizomycotina | Aspergillus fumigatus | Afum | 9926 | Tigr, USA | http://www.tigr.org/tdb/e2k1/afu1/ | YES | ||
Ascomycota | Pezizomycotina | Aspergillus nidulans | Anid | 9541 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | YES | YES | |
Ascomycota | Pezizomycotina | Aspergillus niger | Anig | 11200 | Joint Genome Institute, USA | http://genome.jgi-psf.org/ | |||
Ascomycota | Pezizomycotina | Aspergillus oryzae | Aory | 12062 | NITE, Japan | http://www.bio.nite.go.jp/dogan/Top | YES | ||
Ascomycota | Pezizomycotina | Botrytis cinerea | Bcin | 16446 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | |||
Ascomycota | Pezizomycotina | Chaetomium globosum | Cglo | 11124 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | YES | ||
Ascomycota | Pezizomycotina | Coccidioides immitis | Cimm | 10457 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | |||
Ascomycota | Pezizomycotina | Fusarium graminearum | Fgra | 11640 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | YES | YES | YES |
Ascomycota | Pezizomycotina | Magnaporthe grisea | Mgri | 11109 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | YES | YES | |
Ascomycota | Pezizomycotina | Nectria haematococca | Nhae | 16237 | Joint Genome Institute, USA | http://genome.jgi-psf.org/ | |||
Ascomycota | Pezizomycotina | Neurospora crassa | Ncra | 10082 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | YES | YES | |
Ascomycota | Pezizomycotina | Sclerotinia sclerotiorum | Sscl | 14522 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | |||
Ascomycota | Pezizomycotina | Stagonospora nodorum | Snod | 16597 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | |||
Ascomycota | Pezizomycotina | Trichoderma reesei | Tree | 9997 | Joint Genome Institute, USA | http://genome.jgi-psf.org/ | YES | YES | |
Ascomycota | Saccharomycotina | Ashbya gossypii | Agos | 4726 | Ashbya Genome Database, Switzerland | http://agd.unibas.ch/ | YES | ||
Ascomycota | Saccharomycotina | Candida albicans | Calb | 6165 | Stanford University, UK | http://www-sequence.stanford.edu/group/candida/ | YES | YES | |
Ascomycota | Saccharomycotina | Candida glabrata | Cgla | 5181 | Genolevures Consortium, France | http://cbi.labri.fr/Genolevures/ | YES | ||
Ascomycota | Saccharomycotina | Candida guilliermondii | Cgui | 5920 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | |||
Ascomycota | Saccharomycotina | Candida lusitaniae | Clus | 5941 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | |||
Ascomycota | Saccharomycotina | Debaryomyces hansenii | Dhan | 6318 | Genolevures Consortium, France | http://cbi.labri.fr/Genolevures/ | YES | ||
Ascomycota | Saccharomycotina | Kluyveromyces lactis | Klac | 5327 | Genolevures Consortium, France | http://cbi.labri.fr/Genolevures/ | YES | ||
Ascomycota | Saccharomycotina | Pichia pastoris | Ppas | 5999 | Integrated genomics, USA | http://ergo.integratedgenomics.com/ERGO/ | |||
Ascomycota | Saccharomycotina | Pichia stipitis | Psti | 5839 | Joint Genome Institute, USA | http://genome.jgi-psf.org/ | |||
Ascomycota | Saccharomycotina | Saccharomyces castellii | Scas | 4677 | Saccharomyces Genome Database, USA | http://www.yeastgenome.org/ | |||
Ascomycota | Saccharomycotina | Saccharomyces cerevisiae | Scer | 5888 | Saccharomyces Genome Database, USA | http://www.yeastgenome.org/ | YES | YES | YES |
Ascomycota | Saccharomycotina | Saccharomyces kluyveri | Sklu | 2968 | Saccharomyces Genome Database, USA | http://www.yeastgenome.org/ | |||
Ascomycota | Saccharomycotina | Yarrowia lipolytica | Ylip | 6521 | Genolevures Consortium, France | http://cbi.labri.fr/Genolevures/ | YES | YES | |
Basidiomycota | Hymenomycetes | Coprinus cinereus | Ccin | 13544 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | |||
Basidiomycota | Hymenomycetes | Cryptococcus neoformans | Cneo | 7302 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | |||
Basidiomycota | Hymenomycetes | Phanerochaete chrysosporium | Pchr | 10048 | Joint Genome Institute, USA | http://genome.jgi-psf.org/ | YES | YES | |
Basidiomycota | Ustilaginomycetes | Ustilago maydis | Umay | 6522 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ | YES | ||
Zygomycota | Zygomycetes | Rhizopus oryzae | Rory | 17467 | Broad Institute, USA | http://www.broad.mit.edu/annotation/fungi/fgi/ |