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Table 2 Differentially expressed genes of the mitochondrial functions and glucose metabolism

From: Effect of starvation on global gene expression and proteolysis in rainbow trout (Oncorhynchus mykiss)

Symbol

Gene name

ACC.#

p value

GO Term

Fold change

UCRC

Ubiquinol-cytochrome c reductase complex

CA038364

2.0E-02

electron transport – GO:0006118

-4.4

CYBRD1

Cytochrome b reductase 1

CK990761

2.0E-02

electron transport – GO:0006118

-2.4

COX4I1

Cytochrome c oxidase subunit IV isoform 1

CK990997

5.2E-04

electron transport – GO:0006118

-3.3

COX6B1

Cytochrome c oxidase subunit Vib polypeptide 1 (ubiquitous)

CA047209

7.9E-03

electron transport – GO:0006118

-3.8

COX7A2

Cytochrome c oxidase subunit VIIa polypeptide 2 (liver)

CB511353

4.4E-02

electron transport – GO:0006118

-3.1

Cox6c

Cytochrome c oxidase, subunit VIc

CA044426

2.4E-03

electron transport – GO:0006118

-4.3

Cox17

Cytochrome c oxidase, subunit XVII assembly protein homolog

CB507314

3.4E-02

electron transport – GO:0006118

-2.2

 

Similar to NP_008189.1 cytochrome c oxidase subunit II

CA768526

3.5E-03

electron transport – GO:0006118

-2.2

 

Similar to NP_536845.1 cytochrome c oxidase subunit I

CB494005

2.0E-04

electron transport – GO:0006118

-3.1

 

Similar to NP_006917.1 cytochrome c oxidase subunit I

CN442555

8.8E-03

electron transport – GO:0006118

-2.4

 

Similar to NP_536846.1 cytochrome c oxidase subunit II

CN442553

4.3E-04

electron transport – GO:0006118

-6.0

ATP5G1

ATP synthase, H+ transporting, mitochondrial F0 complex, C1

CK991109

1.3E-02

ATP synthesis – GO:0015986

-2.5

ATP5J2

ATP synthase, H+ transporting, mitochondrial F0 complex, F2

CB493612

8.3E-03

ATP biosynthesis – GO:0006754

-5.0

Atp5l

ATP synthase, H+ transporting, mitochondrial F0 complex, g

CB497057

3.5E-03

ATP synthesis – GO:0015986

-3.3

ATP5B

ATP synthase, H+ transporting, mitochondrial F1 complex, beta

CK990869

1.7E-04

ATP synthesis – GO:0015986

-3.9

ATP6V1H

ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H

CA053755

9.7E-03

ion transport – GO:0006811

-2.4

 

Similar to mitochondrial ATP synthase epsilon chain

CB496505

8.2E-04

ATP biosynthesis – GO:0006754

-5.7

SUCLG1

Succinyl-CoA synthetase alpha subunit

CB498701

1.4E-02

succinate-CoA ligase (GDP-forming)-GO:0004776

4.2

Slc25a5

Mitochondrial carrier, adenine nucleotide translocator, member 5

CA058445

2.5E-02

transport – GO:0006810

-2.6

SLC25A6

Mitochondrial carrier; adenine nucleotide translocator, member 6

CK990577

2.2E-02

transport – GO:0006810

-2.4

SLC25A25

Mitochondrial carrier; phosphate carrier, member 25

CA042906

3.1E-03

transport – GO:0006810

-3.9

TOMM7

Translocase of outer mitochondrial membrane 7

CB497943

1.0E-03

protein transport – GO:0015031

-3.7

TOMM40

Translocase of outer mitochondrial membrane 40

CB498734

2.4E-04

lipid transporter activity – GO:0005319

5.4

GAPDH

Glyceraldehyde-3-phosphate dehydrogenase

CA050886

4.8E-03

GO:0003824 : catalytic activity

-2.9

RPIA

Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase)

CB503502

1.2E-02

pentose-phosphate shunt – GO:0009052

1.8

ST6GALNAC6

ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6

CA050762

2.4E-02

carbohydrate metabolism – GO:0005975

-2.0

Fahd1

Fumarylacetoacetate hydrolase domain containing 1

CB492598

1.5E-02

metabolism – GO:0008152

-2.2

Tat

Tyrosine aminotransferase

CA056381

2.6E-02

amino acid and derivative metabolism – GO:0006519

-2.5

FUK

Fucokinase

CA040903

5.5E-04

fucokinase activity – GO:0050201

4.7

Ces2

Carboxylesterase 2

CA039230

4.3E-02

catabolism – GO:0009056

1.7

Ces6

Carboxylesterase 6

CB496876

2.8E-02

carboxylesterase activity – GO:0004091

1.7

SAT

Spermidine/spermine N1-acetyltransferase

CB488575

3.4E-03

diamine N-acetyltransferase activity – GO:0004145

3.8