Table 3 Comparison of array based clonotyping to cloning and sequencing of PCR products: Subject B
Array analysis | Cloning/sequencing | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
Clonotype | 1 | 2 | 3 | Mean | (SD) | 1 | 2 | 3 | Mean | (SD) |
50 | 61 | 45 | 70 | 58.6 | (+/-12.5) | 46 | 24 | 0 | 23.2 | (+/-23) |
4 | 11 | 25 | 11 | 15.5 | (+/-7.8) | 30 | 53 | 36 | 39.8 | (+/-11.7) |
13 | 0 | 12 | 7 | 6.3 | (+/-5.9) | 3 | 14 | 11 | 9.1 | (+/-5.4) |
64 | 12 | 3 | 0 | 5.0 | (+/-6.3) | 3 | 1 | 0 | 1.3 | (+/-1.6) |
94 | 7 | 8 | 0 | 4.9 | (+/-4.3) | 6 | 7 | 1 | 4.9 | (+/-3.1) |
83 | 0 | 0 | 5 | 1.7 | (+/-2.9) | 0 | 0 | 0 | 0 | (+/-0) |
11 | 5 | 0 | 0 | 1.7 | (+/-2.9) | 5 | 0 | 0 | 1.8 | (+/-3.2) |
1 | 0 | 2 | 2 | 1.3 | (+/-1.1) | 2 | 0 | 0 | 0.5 | (+/-0.9) |
93 | 0 | 0 | 3 | 1.0 | (+/-1.7) | 0 | 0 | 0 | 0 | (+/-0) |
53 | 2 | 0 | 0 | 0.7 | (+/-1.2) | 0 | 0 | 0 | 0 | (+/-0) |
47 | 0 | 0 | 1 | 0.3 | (+/-0.6) | 0 | 0 | 50 | 16.7 | (+/-28.9) |
44 | 0 | 0 | 1 | 0.3 | (+/-0.6) | 0 | 0 | 0 | 0 | (+/-0) |
49 | 1 | 0 | 0 | 0.3 | (+/-0.6) | 2 | 1 | 0 | 0.7 | (+/-0.8) |
107 | 1 | 0 | 0 | 0.3 | (+/-0.6) | 1 | 0 | 0 | 0.3 | (+/-0.5) |
2 | 0 | 1 | 0 | 0.3 | (+/-0.6) | 1 | 0 | 0 | 0.3 | (+/-0.5) |
51 | 0 | 1 | 0 | 0.3 | (+/-0.6) | 1 | 0 | 0 | 0.3 | (+/-0.5) |
17 | 0 | 1 | 0 | 0.3 | (+/-0.6) | 0 | 0 | 0 | 0 | (+/-0) |
30 | 0 | 1 | 0 | 0.3 | (+/-0.6) | 0 | 0 | 0 | 0 | (+/-0) |
41 | 0 | 1 | 0 | 0.3 | (+/-0.6) | 0 | 0 | 0 | 0 | (+/-0) |
42 | 0 | 1 | 0 | 0.3 | (+/-0.6) | 0 | 0 | 0 | 0 | (+/-0) |
84 | 0 | 0 | 0 | 0 | (+/-0) | 0 | 0 | 2 | 0.7 | (+/-1.2) |
5 | 0 | 0 | 0 | 0 | (+/-0) | 0 | 1 | 0 | 0.4 | (+/-0.8) |