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Table 3 Comparison of array based clonotyping to cloning and sequencing of PCR products: Subject B

From: Quantitative measurement of pathogen specific human memory T cell repertoire diversity using a CDR3β-specific microarray

  Array analysis Cloning/sequencing
Clonotype 1 2 3 Mean (SD) 1 2 3 Mean (SD)
50 61 45 70 58.6 (+/-12.5) 46 24 0 23.2 (+/-23)
4 11 25 11 15.5 (+/-7.8) 30 53 36 39.8 (+/-11.7)
13 0 12 7 6.3 (+/-5.9) 3 14 11 9.1 (+/-5.4)
64 12 3 0 5.0 (+/-6.3) 3 1 0 1.3 (+/-1.6)
94 7 8 0 4.9 (+/-4.3) 6 7 1 4.9 (+/-3.1)
83 0 0 5 1.7 (+/-2.9) 0 0 0 0 (+/-0)
11 5 0 0 1.7 (+/-2.9) 5 0 0 1.8 (+/-3.2)
1 0 2 2 1.3 (+/-1.1) 2 0 0 0.5 (+/-0.9)
93 0 0 3 1.0 (+/-1.7) 0 0 0 0 (+/-0)
53 2 0 0 0.7 (+/-1.2) 0 0 0 0 (+/-0)
47 0 0 1 0.3 (+/-0.6) 0 0 50 16.7 (+/-28.9)
44 0 0 1 0.3 (+/-0.6) 0 0 0 0 (+/-0)
49 1 0 0 0.3 (+/-0.6) 2 1 0 0.7 (+/-0.8)
107 1 0 0 0.3 (+/-0.6) 1 0 0 0.3 (+/-0.5)
2 0 1 0 0.3 (+/-0.6) 1 0 0 0.3 (+/-0.5)
51 0 1 0 0.3 (+/-0.6) 1 0 0 0.3 (+/-0.5)
17 0 1 0 0.3 (+/-0.6) 0 0 0 0 (+/-0)
30 0 1 0 0.3 (+/-0.6) 0 0 0 0 (+/-0)
41 0 1 0 0.3 (+/-0.6) 0 0 0 0 (+/-0)
42 0 1 0 0.3 (+/-0.6) 0 0 0 0 (+/-0)
84 0 0 0 0 (+/-0) 0 0 2 0.7 (+/-1.2)
5 0 0 0 0 (+/-0) 0 1 0 0.4 (+/-0.8)