Table 4 List of contigs with best E-values obtained on the TR-BW library sequences
Contig (TRbwC) | Number of sequences per contig | Putative identification on Blastx | E-value | GenBank accession number* |
|---|---|---|---|---|
Mitochondrial sequences | ||||
1 | 3 | rRNA 16S large subunit 2542–2964 | 0 | AY741662.1 |
2 | 2 | rRNA 16S large subunit 2962–3499 | 0 | AY741662.1 |
3 | 1 | cytochrome c | 4.10-16 | EF648557 |
4 | 1 | cytochrome c oxidase subunit I Arabella | 3.10-93 | EF648558 |
5 | 1 | NADH dehydrogenase | 5.10-28 | EF648559 |
All processes sequences (E-value<1) | ||||
6 | 5 | carbonic anhydrase | 3.10-123 | AJ439711 |
7 | 1 | carbonic anhydrase 3'UTR | 3.10-136 | AJ439711 |
8 | 19 | hemoglobin (Hb) A1 chain (longer sequencing) | 9.10-20 | EF648449 |
9 | 28 | small similar part of Hb A1 chain (2) | 8.10-6 | EF648560 |
10 | 1 | small similar part of Hb A1 chain (3) | 0.047 | EF648450 |
11 | 7 | small similar part of Hb A1 chain (4) | 7.10-3 | EF648451 |
12 | 1 | new Hb A2 chain (hit with Arenicola) | 9.10-16 | EF648561 |
13 | 9 | Hb B chain | 8.10-7 | P80592 |
14 | 1 | new Hb B1 chain (hit with Lamellibrachia) | 2.10-11 | EF648568 |
15 | 2 | Hb B2 chain | 2.10-12 | AAW78354 |
16 | 1 | new extracellular Hb linker (hit with Sabella) | 2.10-8 | EF648562 |
17 | 5 | myohemerythrin | 2.10-29 | EF648563 |
18 | 2 | T-cell receptor | 0.58 | EF648564 |
19 | 2 | small nuclear ribonucleoprotein | 6.10-22 | EF648565 |
20 | 2 | oxidoreductase molybdopterin binding | 0.32 | EF648566 |
21 | 1 | ubiquinol cytochrome reductase | 2.10-22 | EF648567 |
22 | 1 | putative calmodulin | 0.034 | EF648452 |
Hypothetical protein (E-value<1) | ||||
23 | 1 | hypothetical protein | 0.33 | EF648569 |
24 | 1 | hypothetical protein | 0.46 | EF648570 |
25 | 2 | hypothetical protein Oryza | 0.087 | EF648571 |
26 | 1 | hypothetical protein | 0.19 | EF648572 |
Unknown sequences (E-value>1 or No Hits Found) | ||||
27 | 24 | unknown sequence | Â | EF648581 |
28 to 59 | GenBank accession numbers EF648573 to EF648580, EF648582 to EF648601, EF648454 to EF648456, EF648453 | |||