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Table 4 (a) Efficiency, accuracy, and error of microarray resequencing and (b) SNP density in the intervals ± 12 bp surrounding correct and incorrect calls of SNP and constant sites in chimpanzee mtDNA (see table 2 for definitions)

From: Interspecies hybridization on DNA resequencing microarrays: efficiency of sequence recovery and accuracy of SNP detection in human, ape, and codfish mitochondrial DNA genomes sequenced on a human-specific MitoChip

(a) Correct Incorrect
Microarray: 498 + 432 = 930 14 + 1940 = 1954
SNP 3.23 + 2.80 = 6.03% 0.09+12.56 = 12.65%
Microarray: 7290 + 4925 = 12215 17 + 336 = 353
no SNP 47.18 + 31.87 = 0.11 + 2.17 = 2.28%
  7788 + 5357 31 (0.20%) errors
  = 13145 (85.07%) + 2276 (14.73%) N
(b) Correct Incorrect
Microarray: 4.72, 11.01 9.14, 14.57
SNP   
Microarray: 3.93, 10.96 6.44, 15.48
no SNP