Table 1 Overview of the DNA copy number changes in 11 intestinal-type adenomas
From: DNA copy number profiles of gastric cancer precursor lesions
Chromosomal aberrations | Flanking clones | ||||
|---|---|---|---|---|---|
Tumour ID | Gains | Losses | Segment size (Mb) | Start | End |
1 | 1p-p36.11 | 26.68 | RP11-465B22 | RP1-159A19 | |
5q13.2-q23.2 | 55.26 | RP11-115I6 | CTB-1054G2 | ||
6p21.33-p21.1 | 13.78 | RP11-346K8 | RP11-227E22 | ||
6p21.1-q16.1 | 52.05 | RP11-89I17 | RP3-393D12 | ||
9q33.1-34.2 | 17.32 | RP11-27I1 | RP11-417A4 | ||
11q23.3 | 4.80 | RP11-4N9 | RP11-730K11 | ||
13q21.1-q31.3 | 39.63 | RP11-200F15 | RP11-62D23 | ||
2 | 1p-1p33 | 46.90 | RP11-465B22 | RP11-330M19 | |
6p21.33-p21.1 | 14.12 | RP11-346K8 | RP11-121G20 | ||
6p21.1-q16.2 | 54.91 | RP11-554O14 | RP11-79G15 | ||
8p-q22.3 | 105.67 | GS1-77L23 | RP11-200A13 | ||
8q24.11-qter | 28.65 | RP11-278L8 | RP5-1056B24 | ||
9q33.1-q34.2 | 13.63 | RP11-85O21 | RP11-417A4 | ||
11p11.2-q13.5 | 31.69 | RP11-58K22 | RP11-30J7 | ||
11q23.3 | 2.62 | RP11-4N9 | RP11-62A14 | ||
12q13.11-q14.1 | 10.57 | RP11-493L12 | RP11-571M6 | ||
13q21.1-q21.33 | 18.24 | RP11-200F15 | RP11-335N6 | ||
13q31.1-q31.3 | 12.49 | RP11-533P8 | RP11-62D23 | ||
16p13.3-q21 | 57.26 | RP11-243K18 | RP11-405F3 | ||
16q21-q22.1 | 5.97 | RP11-105C20 | RP11-298C15 | ||
16q22.1-q24.3 | 22.46 | RP11-63M22 | CTC-240G10 | ||
17 | 81.24 | GS1-68F18 | RP11-567O16 | ||
19 | 61.01 | CTB-1031C16 | GS1-1129C9 | ||
20q11.21-q11.23 | 5.09 | RP3-324O17 | RP5-977B1 | ||
20q13.12-qter | 19.60 | RP1-138B7 | CTB81F12 | ||
3 | - | - | |||
4 | 6p21.1 | 3.32 | RP11-79J5 | RP11-121G20 | |
6p12.3-q22.1 | 76.38 | RP11-79G12 | RP11-59D10 | ||
7 | 156.89 | RP11-510K8 | CTB-3K23 | ||
8q22.3-q23.3 | 9.69 | RP11-142M8 | RP11-261F23 | ||
9q33.1-q34.13 | 12.58 | RP11-55P21 | RP11-83N9 | ||
11q23.3 | 3.04 | RP11-4N9 | RP11-8K10 | ||
13q21.2-q21.33 | 17.05 | RP11-240M20 | RP11-77P3 | ||
13q31.1-q31.3 | 11.68 | RP11-400M8 | RP11-100A3 | ||
16q23.2-q24.3 | 8.92 | RP11-303E16 | RP4-597G12 | ||
20p-q13.2 | 53.40 | CTB-106I1 | RP5-1162C3 | ||
20q13.31-qter | 8.06 | RP5-1167H4 | CTB-81F12 | ||
22q | 33.72 | XX-P8708 | CTB-99K24 | ||
5 | 12q24.31-qter | 11.75 | RP11-322N7 | RP11-1K22 | |
6 | 3 | 193.37 | RP11-299N3 | RP11-279P10 | |
6cen-q24.1 | 88.49 | RP11-91E17 | RP11-86O4 | ||
7 | 156.09 | RP11-510K8 | RP11-518I12 | ||
8 | 144.26 | RP11-91J19 | RP5-1118A7 | ||
13q21.1-q21.33 | 11.86 | RP11-640E11 | RP11-452P23 | ||
13q31.1-q31.3 | 9.62 | RP11-400M8 | RP11-306O1 | ||
20q13.2-q13.31 | 1.41 | RP11-212M6 | RP4-586J11 | ||
7 | 5q21.1-qter | 80.52 | CTC-1564E20 | RP11-281O15 | |
10 | 132.19 | RP11-29A19 | RP11-45A17 | ||
13q21.33-31.1 | 8.76 | RP11-209P2 | RP11-470M1 | ||
8 | 5q22.1-q23.2 | 13.28 | RP11-276O18 | RP11-14L4 | |
6p12.3-q22.1 | 74.37 | RP11-89l17 | RP11-149M1 | ||
9p21.1-pter | 31.18 | RP11-147I11 | RP11-12K1 | ||
10 | 133.18 | RP11-10D13 | RP11-45A17 | ||
13q14.3-q31.3 | 39.71 | RP11-211J11 | RP11-306O1 | ||
17 | 77.65 | GS1-68F18 | RP11-398J5 | ||
19 | 63.31 | CTC-546C11 | CTD-3138B18 | ||
20 | 60.87 | RP4-686C3 | RP4-591C20 | ||
22q | 31.25 | XX-bac32 | CTA-722E9 | ||
9 | 5q14.3-q23.2 | 33.06 | RP11-302L17 | RP11-14L4 | |
6p22.2-q22.3 | 8.44 | RP11-91n3 | RP11-88h24 | ||
6p12.1-q24.1 | 88.89 | RP11-7h16 | RP11-368P1 | ||
8 | 145.95 | GS1-77L23 | CTC-489D14 | ||
9q33.1-qter | 13.60 | RP11-91G7 | GS1-135I17 | ||
10 | 133.18 | RP11-10D13 | RP11-45A17 | ||
11q23.3 | 3.16 | RP11-4N9 | RP11-215D10 | ||
13q14.3-qter | 58.59 | RP11-240M20 | RP11-480K16 | ||
20q13.2-q13.31 | 1.96 | RP11-55E1 | RP5-832E24 | ||
21cen-q21.3 | 17.39 | RP11-193B6 | RP11-41N19 | ||
10 | 8q22.3-q23.3 | 12.93 | RP11-142M8 | RP11-143P23 | |
10 | 134.52 | RP11-10D13 | RP11-122K13 | ||
13q21.1-q21.33 | 18.03 | RP11-322F18 | RP11-335N6 | ||
13q31.1-q31.3 | 8.99 | RP11-533P8 | RP11-505P2 | ||
11 | - | - |