From: Separating the effects of mutation and selection in producing DNA skew in bacterial chromosomes
Species | Group | RG | RT | Skew1 |
---|---|---|---|---|
Chromosomes with strongest overall skew | ||||
Candidatus Blochmannia floridanus | Gammaproteobacteria | 0.433 | 0.107 | 0.446 |
Clostridium acetobutylicum ATCC 824 | Firmicutes | 0.426 | -0.087 | 0.435 |
Ehrlichia canis str. Jake | Alphaproteobacteria. | 0.346 | 0.226 | 0.413 |
Ehrlichia ruminantium str. Welgevonden | Alphaproteobacteria | 0.360 | 0.191 | 0.408 |
Ehrlichia chaffeensis str. Arkansas | Alphaproteobacteria | 0.360 | 0.191 | 0.407 |
Ehrlichia ruminantium str. Gardel | Alphaproteobacteria | 0.353 | 0.190 | 0.401 |
Ehrlichia ruminantium str. Welgevonden | Alphaproteobacteria | 0.349 | 0.188 | 0.397 |
Lactobacillus salivarius subsp. salivarius UCC118 | Firmicutes | 0.362 | -0.121 | 0.382 |
Borrelia burgdorferi B31 | Spirochaetes | 0.229 | 0.300 | 0.378 |
Clostridium perfringens str. 13 | Firmicutes | 0.350 | -0.086 | 0.360 |
Borrelia garinii PBi | Spirochaetes | 0.207 | 0.287 | 0.354 |
Xylella fastidiosa Temecula1 | Gammaproteobacteria | 0.254 | 0.228 | 0.341 |
Bartonella quintana str. Toulouse | Alphaproteobacteria | 0.300 | 0.080 | 0.311 |
Clostridium tetani E88 | Firmicutes | 0.273 | -0.137 | 0.305 |
Bartonella henselae str. Houston-1 | Alphaproteobacteria | 0.284 | 0.080 | 0.295 |
Xylella fastidiosa 9a5c | Gammaproteobacteria | 0.197 | 0.218 | 0.294 |
Lactobacillus acidophilus NCFM | Firmicutes | 0.286 | -0.024 | 0.287 |
Buchnera aphidicola str. Bp | Gammaproteobacteria | 0.254 | 0.124 | 0.282 |
Lactobacillus johnsonii NCC 533 | Firmicutes | 0.260 | -0.042 | 0.263 |
Carboxydothermus hydrogenoformans Z-2901 | Firmicutes | 0.260 | 0.000 | 0.260 |
Chromosomes with weakest overall skew | ||||
Corynebacterium efficiens YS-314 | Actinobacteria | 0.023 | 0.019 | 0.030 |
Nostoc sp. PCC 7120 | Cyanobacteria | 0.028 | 0.005 | 0.028 |
Sinorhizobium meliloti 1021 plasmid pSymA | Alphaproteobacteria | 0.022 | 0.014 | 0.026 |
Mycobacterium avium subsp. paratuberculosis K-10 | Actinobacteria | 0.002 | 0.025 | 0.025 |
Anaeromyxobacter dehalogenans 2CP-C | Deltaproteobacteria | 0.022 | -0.009 | 0.024 |
Mycoplasma hyopneumoniae 232 | Firmicutes | 0.017 | 0.016 | 0.023 |
Mycoplasma synoviae 53 | Firmicutes | -0.012 | 0.016 | 0.020 |
Wigglesworthia glossinidia | Gammaproteobacteria | 0.016 | 0.011 | 0.020 |
Mycoplasma mycoides subsp. mycoides SC str. PG1 | Firmicutes | 0.017 | 0.009 | 0.019 |
Mycoplasma gallisepticum R | Firmicutes | -0.014 | 0.009 | 0.016 |
Aquifex aeolicus VF5 | Aquificae | -0.006 | -0.014 | 0.015 |
Mycoplasma hyopneumoniae 7448 | Firmicutes | -0.012 | -0.002 | 0.013 |
Thermosynechococcus elongatus BP-1 | Cyanobacteria | -0.005 | -0.010 | 0.012 |
Synechocystis sp. PCC 6803 | Cyanobacteria | 0.010 | -0.002 | 0.010 |
Synechococcus sp. JA-2-3B'a(2–13) | Cyanobacteria | 0.009 | -0.001 | 0.009 |
Baumannia cicadellinicola str. Hc | Gammaproteobacteria | -0.003 | -0.005 | 0.006 |
Anabaena variabilis ATCC 29413 | Cyanobacteria | -0.005 | 0.003 | 0.006 |
Mycoplasma pneumoniae M129 | Firmicutes | 0.003 | 0.003 | 0.004 |
Synechococcus sp. JA-3-3Ab | Cyanobacteria | 0.001 | 0.004 | 0.004 |
Gloeobacter violaceus PCC 7421 | Cyanobacteria | 0.003 | -0.002 | 0.004 |