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Figure 2 | BMC Genomics

Figure 2

From: Investigation of factors affecting prediction of protein-protein interaction networks by phylogenetic profiling

Figure 2

Comparison of different combinations of reference genome sets and E-value thresholds. a) E-3 b) E-5 c) E-10 d) E-15. Positive Predicted Value (PPV) was calculated using COG functional category as described in the methods section. Random indicates protein-protein interactions generated by scrambling proteins identities for each reference genome set. In Additional file 1, PPV was calculated using EcoCyc.

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BMC Genomics

ISSN: 1471-2164

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