Skip to main content

Table 5 TFBS over-represented in kinetic waves induced by LPS and PIC in the HsM1 dataset

From: Functional genomic delineation of TLR-induced transcriptional networks

Kinetics set

TFBS motif

Stimulator

# of genes

p-value

EE

---

LPS

12

 
  

PIC

80

---

ED

NF-κB (M00053)

LPS

34

7.6·10-7

  

PIC

7

---

DD

ISRE (M00258)

LPS

225

1.8·10-5*

  

PIC

111

1.9·10-7

  1. * a similar TFBS motif of the same element (M00972) received p-value 8.4·10-7.