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Table 1 General information of the sequences analyzed in this study.

From: Global patterns of sequence evolution in Drosophila

Species

Data repository and release

Muller element A

Muller element B

Muller element C

Muller element D

Muller element E

D. melanogaster

NCBI, release 3.1

X (21.8)

2L (22.1)

2R (20.3)

3L (23.3)

3R(27.9)

D. simulans

UCSC genome browser, April 2005

X (14.4)

2L (20.7)

2R (18.2)

3L (21.2)

3R (26.0)

D. yakuba

UCSC genome browser, November 2005

X (21.5)

2L (22.2)

2R (21.0)

3L (23.9)

3R (28.6)

D. ananassae

UCSC genome browser, August 2005

X (12.4)

3R (16.1)

3L (19.7)

2R (23.0)

2L (24.5)

D. pseudoobscura

UCSC genome browser, November 2004, freeze 2

XL (23.5)

4 (26.0)

3 (19.0)

XR (23.6)

2 (29.7)

D. virilis

UCSC genome browser, August 2005

X (18.9)

4 (19.9)

5 (20.4)

3 (25.0)

2 (19.0)

D. grimshawi

UCSC genome browser, August 2005

X (21.0)

3 (14.9)

2 (18.8)

5 (10.7)

4 (24.2)

  1. For each species, the names of the chromosomes and the amount of DNA analyzed per chromosome (in Mb) are indicated. Accession numbers for D. melanogaster chromosomes: Chromosome X: NC_004354.1; Chromosome 2L: NT_033779.2; Chromosome 2R: NT_033778.1; Chromosome 3L: NT_037436.1; Chromosome 3R: NT_033777.1. Scaffolds used for D. grimshawi were as follows: chromosome X (24821, 25009, 25041); chromosome 3 (24946, 24992, 25029, 25033); chromosome 2 (24999, 25044); chromosome 5 (24997, 25023, 25050); chromosome 2 (24940, 25013).