Table 2 BJ1 ORFs with identifiable BlastX matches to data base entries.
From: Sequence analysis of an Archaeal virus isolated from a hypersaline lake in Inner Mongolia, China
ORF | Homologs (% Identity) |
|---|---|
9 | 59% similarity (E 10-8) to ORF58 halovirus φ Ch1 (AAM88732) |
10 | 54% similarity (E10-5) to protein Haloquadratum walsbyi (CAJ52235) |
17 | similarity (E 10-13) to protein from Natronomonas pharaonis (CR936257.1) |
55 | similarity (E 10-7) to a protein of φ Ch1 (NP 665930.1) |
24 | No significant match to any described protein. InterPro suggests DNA binding protein |
5 | similarity (E 10-3) to bacterial proteins with DnaJ domain; role in DNA replication? |
6 | 65% similarity (E 10-6) to protein (AAG20925) of Halobacterium sp. NRC-1. A metal regulated homodimeric repressor with a 'winged helix' DNA binding domain |
16 | 60% similarity (E 10-67) to a Har. marismortui protein YP_136906; member of the ORC1/CDC-6 superfamily of NTPases involved in DNA replication |
20 | 54% similarity (E 10-13) to halovirus φ H1 repressor protein(AAV47198.1) with a winged helix DNA binding domain |
21 | 66% similarity (E 10-17) to the Hqr. walsbyi PadR transcriptional regulator (CAJ51359.1) |
31 | similarity is to a Har. marismortui phage integrase (E 10-66) 45% ID (AAV47153 the λ bacteriophage recombinase family, pfam00589 |
35 | DNA helicase? 62% similarity (E 10-128) to Har. marismortui protein (AAV47142) of the Cdc-46/Mcm family of DNA dependent ATPases. |
39 | 68% similarity (E 0.05) to ArsR-like transcriptional regulator (CAJ51299) from Hqr. Walsbyi (92 amino acids long); the similarity being from amino acids 15–68 in ORF39 with 20–72 in CAJ51299 |
43 | 56% similarity (E 10-37), to halovirus HF1 protein (AAO61337.1) which may be a YonJ like, small subunit of the DNA polymerase, (COG1311) |
48 | 54% similarity to Listonella pelagia phage phiHSIC small terminase subunit (YP_224235.1 |
49 | 43% similarity (E 0.01) to Streptococcus pneumoniae bacteriophage EJ-1 large terminase (CAE82121) |
50 | 54% similarity (E 10-77) to the putative portal protein (NP_665924) of Nab. magadii virus φ Ch1. |
52 | 49% similarity (E 10-13) to the capsid protein gpD (AAM88683) of halovirus φ Ch1 |
53 | 48% similarity (E 10-29) to hp32 (CAA56442) of Hbt. salinarum virus φ H and 47% similarity (E 10-24) to the capsid protein gpE (AAG32163) of halovirus φ Ch1 |
51 | 51% similarity (E 10-15) to Enterococcus faecium glycosyl transferase (EAN10921). LPS biosynthesis protein. |