Table 3 Clover Cis-Element Over-Representation: Common Enriched TFBSs Among Species
TFBSs (PWM) | Rat | Mouse | Human | |||
|---|---|---|---|---|---|---|
Raw Score | p | Raw Score | p | Raw Score | p | |
V$SP1_Q6_01 | 177 | 0.017 | 235 | < 0.001 | 217 | < 0.001 |
V$SP1_Q2_01 | 192 | 0.031 | 248 | < 0.001 | 240 | < 0.001 |
V$SP1_Q4_01 | 188 | 0.038 | 256 | < 0.001 | 231 | < 0.001 |
V$SP1_Q6 | 175 | 0.043 | 242 | < 0.001 | 235 | < 0.001 |
Background Sequences: | 9,201 Rat Promoter Sequences (9,215,186 bp; 51.4% GC) | |||||
9,475 Mouse Promoter Sequences (9,483,474 bp; 49.2% GC) | ||||||
12,367 Human Promoter Sequences (12,379,367 bp; 53.5% GC) | ||||||
Experimental Promoters: | 133 Rat Promoters (51.6% GC) | |||||
144 Mouse Promoters (51.4% GC) | ||||||
159 Human Promoters (54.7% GC) | ||||||