L-arginine-degrading pathways in Synechocystis sp. PCC 6803 | ORF | Database # | Length (aa) | pI | MW (kDa) | Best hit vs. gene | Organism | E-value | Similarity (ident./pos. aa) |
---|---|---|---|---|---|---|---|---|---|
L-Arginine decarboxylase | |||||||||
L-Arginine decarboxylase (A1) | sll1683 | NP_440109 | 483 | 5.44 | 51.84 | speA | B. subtilis | 5.0e-103 | 40/61 |
slr0662 | NP_442871 | 695 | 5.08 | 78.24 | speA | X. campestris | 2.0e-134 | 41/56 | |
slr1312 | NP_439907 | 659 | 5.30 | 74.48 | speA | X. campestris | 5.0e-121 | 38/56 | |
Agmatinase (A2.1) | sll1077 | NP_440618 | 390 | 5.06 | 42.96 | speB2 | P. aeruginosa | 1.1e-40 | 33/41 |
sll0228 | NP_440030 | 306 | 4.90 | 33.46 | speB | B. subtilis | 1.6e-22 | 30/45 | |
Putrescine oxidase or transaminase (A3) | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. |
4-Aminobutyraldehyde dehydrogenase (A4) | sll1495 | NP_442886 | 397 | 8.43 | 43.54 | BMEII0291 | B. melitensis | 1.2e-93 | 42/61 |
4-Aminobutyrate transaminase (A5) | slr1022 | NP_440479 | 429 | 5.11 | 46.54 | gabT | P. aeruginosa | 6.7e-58 | 33/50 |
sll0017 | NP_442115 | 433 | 5.13 | 45.87 | gabT | E. coli | 5.7e-41 | 30/44 | |
Succinate semialdehyde dehydrogenase (A6) | slr0370 | NP_442020 | 454 | 5.02 | 48.75 | gabD | X. campestris | 5.0e-121 | 47/65 |
sll1561 | NP_441689 | 990 | 5.46 | 110.03 | gabD | P. aeruginosa | 2.7e-66 | 17/25 | |
L-Arginine deiminase | |||||||||
L-Arginine deiminase (D1) | sll1336 | NP_442829 | 705 | 5.40 | 78.33 | cyb_250 | S. yellowstone | 0.0 | 61/79 |
L-Ornithine transcarbamoylase (D2) |
sll0902
slr1476 |
NP_442776 NP_441572 |
308 331 |
5.38 6.53 |
33.62 33.39 |
argF
argF |
P. aeruginosa
P. aeruginosa |
1.1e-77 7.2e-13 |
47/66 26/42 |
Carbamate kinase (D3) | sll0573 | NP_443041 | 308 | 5.66 | 32.93 | ygcA | E. coli | 8.1e-52 | 41/58 |
L-Ornithine transaminase (D4) | slr1022 | NP_440479 | 429 | 5.11 | 46.54 | rocD | B. subtilis | 2.1e-61 | 32/52 |
Δ^{1}Pyrroline-5-carboxylate dehydrogenase (D5) | slr0370 | NP_442020 | 454 | 5.02 | 48.75 | ycgN | B. subtilis | 7.9e-40 | 26/40 |
Δ^{1}Pyrroline-5-carboxylate reductase | slr0661 | NP_442689 | 128 | 5.11 | 14.4 | slr0661 | S. PCC 6803 | 0.0 | 100/100 |
Proline oxidase | sll1561 | NP_441689 | 990 | 5.46 | 110.03 | rocA | B. subtilis | 6.0e-138 | 25/34 |
L-Arginine oxidase/dehydrogenase | |||||||||
L-Arginine oxidase/dehydrogenase (E1) | slr0782 | NP_442072 | 471 | 5.19 | 51.37 | aoxA | S. elongatus | 1.7e-18 | 20/35 |
4-Guanidino butyrase (E2) | sll1077 | NP_440618 | 390 | 5.06 | 42.96 | gbuA | P. aeruginosa | 1.1e-40 | 26/41 |
sll0228 | NP_440030 | 306 | 4.90 | 33.46 | gbuA | P. aeruginosa | 1.1e-19 | 26/41 | |
4-Aminobutyrate transaminase (E3) | slr1022 | NP_440479 | 429 | 5.11 | 46.54 | gabT | P. aeruginosa | 6.7e-58 | 33/50 |
sll0017 | NP_442115 | 433 | 5.13 | 45.87 | gabT | P. aeruginosa | 5.7e-41 | 30/44 | |
Succinate semialdehyde dehydrogenase (E4) | slr0370 | NP_442020 | 454 | 5.02 | 48.75 | gabD | X. campestris | 5.0e-121 | 47/65 |
sll1561 | NP_441689 | 990 | 5.46 | 110.03 | gabD | P. aeruginosa | 2.7e-66 | 17/25 |