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Table 5 Database entries of genes from 24 cyanobacterial genomes encoding putative L-arginine decarboxylases (A1), agmatinases (A2.1), agmatine deiminases (A2.2), N-carbamoylputrescine hydrolases (A2.3), putrescine oxidases or putrescine transaminases (A3), and 4-aminobutyraldehyde dehydrogenases (A4) of the L-arginine decarboxylase pathway.

From: Bioinformatic evaluation of L-arginine catabolic pathways in 24 cyanobacteria and transcriptional analysis of genes encoding enzymes of L-arginine catabolism in the cyanobacterium Synechocystis sp. PCC 6803

Enzyme

A1

A2.1

A2.2

A2.3

A3

A4

Marine species

Prochlorococcus marinus SS 120

Pro1112, Pro0049

Pro1849

n.d

Pro1045

n.d

Pro1319

Prochlorococcus marinus str. MIT 9211

P9211_03242, P9211_08607

P9211_09067

n.d

P9211_03592

n.d

P9211_07012

Prochlorococcus marinus MIT 9312

PMT9312_1095, PMT9312_0046

PMT9312_1779

n.d

PMT9312_0615

n.d

PMT9312_0337

Prochlorococcus marinus MIT 9313

PMT1066, PMT2150

PMT2214

n.d

PMT0395

n.d

PMT0191

Prochlorococcus marinus MED 4

PMM1084, PMM0045

PMM1686

n.d

PMM0615

n.d

PMM1215, PMM0331

Prochlorococcus marinus NATL 2A

PMN2A_0665, PMN2A_1378

PMN2A_1287

n.d

PMN2A_0052

n.d

PMN2A_1709

Synechococcus sp. CC 9605

Syncc9605_1621, Syncc9605_2513

Syncc9605_1082Syncc9605_2591

n.d

Syncc9605_1134

n.d

Syncc9605_0497

Synechococcus sp. CC 9902

Syncc9902_1380, Syncc9902_2172

Syncc9902_2230

n.d

Syncc9902_1323

n.d

Syncc9902_1838

Synechococcus sp. WH 8102

SYNW0944, SYNW2359

SYNW1412, SYNW2422

n.d

SYNW1008

n.d

SYNW_1956

Synechococcus sp. WH 7805

WH7805_04481, WH7805_10353

WH7805_09974

n.d

WH7805_01902

n.d

n.d

Synechococcus sp. WH 5701

WH5701_04905, WH5701_10310

WH5701_03684, WH5701_03860

n.d

WH5701_10020, WH5701_10155

n.d

WH5701_06196

Synechococcus sp. RS 9917

RS9917_01007, RS9917_06495

RS9917_06190

n.d

RS9917_11395

n.d

RS9917_02641

Crocosphaera watsonii WH 8501

CwatDRAFT_1880

n.d

n.d

CwatDRAFT_4111

n.d

CwatDRAFT_2611CwatDRAFT_0842 CwatDRAFT_0969 CwatDRAFT_1032

Trichodesmium erythraeum IMS 101

TeryDRAFT_0894, TeryDRAFT_0959, TeryDRAFT_0311

TeryDRAFT4567

n.d

TeryDRAFT_0835

n.d

TeryDRAFT_3296, TeryDRAFT_3923

Freshwater species

Synechococcus elongatus sp. PCC 6301

Syc0823_d, Syc0510_c

n.d

SYC1703_c, SYC1643_d

Syc1946_d, Syc1745_c

n.d

Syc1030_d

Synechococcus elongatus sp. PCC 7942

Synpcc7942_0707, Synpcc7942_1037

n.d

Synpcc79422402 Synpcc79422461

Synpcc79422145 Synpcc79422358

n.d

Synpcc7942_0489

Synechococcus Yellowstone sp. JA-3-3-AB

CYA_1002, CYA_0128

CYA_0859

n.d

CYA_0558

n.d

CYA_0364

Synechococcus Yellowstone sp. JA-2-3Ba (2-13)

CYB_2779, CYB_0482

CYB_1744

n.d

CYB_1181

n.d

CYB_0715, CYB_1893

Thermosynechococcus elongatus BP-1

Tlr1866, Tll1807

n.d.

Tlr0111

Tlr0112, Tll0920

n.d

Tlr0221

Synechocystis sp. PCC 6803

Sll1683, Slr0662, Slr1312

Sll1077, Sll0228

n.d

Sll0601, Sll1640

n.d

Sll1495, Slr0370

Gloeobacter violaceus PCC 7421

Gll4070, Gll3478

n.d

Glr1681

Glr1682, Glr2043

n.d

Gll2207, Gll1504, Glr3848, Gll2805

Nostoc sp. PCC 7120

All3401, All4887

Alr2310

n.d

Alr2001

n.d

Alr2826, Alr3771, All3556, All5022

Nostoc punctiforme PCC 73102

Npun02000556, Npun02000612

Npun02002114

n.d

Npun02002053

n.d

Npun02003427, Npun02002895, Npun02002692, Npun02003702

Anabaena variabilis ATCC 29413

Ava_2157, Ava_3423

Ava_0127

n.d

Ava_5061

n.d

Ava_1107, Ava_1554, Ava_3534, Ava_2258

  1. N.d. = not detected.