Skip to main content

Table 6 Database entries of genes from 24 cyanobacterial genomes encoding putative arginases (B1), L-ornithine transaminases (C2), and Δ1 pyrroline-5-carboxylate dehydrogenases (C3) of the arginase pathway.

From: Bioinformatic evaluation of L-arginine catabolic pathways in 24 cyanobacteria and transcriptional analysis of genes encoding enzymes of L-arginine catabolism in the cyanobacterium Synechocystis sp. PCC 6803

Enzyme

B1

B2

B3

Marine species

Prochlorococcus marinus SS 120

Pro1849

Pro1375, Pro1626

Pro0374

Prochlorococcus marinus str. MIT 9211

P9211_09067

P9211_02002, P9211_10217

P9211_07012

Prochlorococcus marinus MIT 9312

PMT9312_1779

PMT9312_1397, PMT9312_1565

PMT9312_0337

Prochlorococcus marinus MIT 9313

PMT2214

PMT0331, PMT1493

PMT0191

Prochlorococcus marinus MED 4

PMM1686

PMM1301, PMM1472

PMM0331

Prochlorococcus marinus NATL 2A

PMN2A_1287

PMN2A_0867, PMN2A_1003

PMN2A_1709

Synechococcus sp. CC 9605

Syncc9605_1082, Syncc9605_2591

Syncc9605_0858, Syncc9605_2052, Syncc9605_0659

Syncc9605_0497

Synechococcus sp. CC 9902

Syncc9902_2230

Syncc9902_1534, Syncc9902_0620

Syncc9902_1838

Synechococcus sp. WH 8102

SYNW1412, SYNW2422

SYNW1634, SYNW0629

SYNW1956

Synechococcus sp. WH 7805

WH7805_06086, WH7805_09974

WH7805_05656, WH7805_12388, WH7805_13803

WH7805_06416

Synechococcus sp. WH 5701

WH5701_03684, WH5701_03860

WH5701_07406, WH5701_15376

WH5701_06196

Synechococcus sp. RS 9917

RS9917_06190

RS9917_02041, RS9917_05240

RS9917_02641

Crocosphaera watsonii WH 8501

n.d.

CwatDRAFT_5161

CwatDRAFT_0865, CwatDRAFT_0842, CwatDRAFT_0969

Trichodesmium erythraeum IMS 101

TeryDRAFT_4567

TeryDRAFT_3251

TeryDRAFT_2672 TeryDRAFT_3296, TeryDRAFT_3923

Freshwater species

Synechococcus elongatus sp. PCC 6301

n.d.

Syc0599_c, Syc1466_c

Syc1030_d

Synechococcus elongatus sp. PCC 7942

n.d.

Synpcc7942_0943, Synpcc7942_0031

Synpcc7942_0489

Synechococcus Yellowstone sp. JA-3-3-AB

CYA_0859

CYA_1537, CYA_0689

CYA_0364

Synechococcus Yellowstone sp. JA-2-3Ba (2-13)

CYB_1744

CYB_1419, CYB_2128

CYB_0516, CYB_0715, CYB_1893

Thermosynechococcus elongatus BP-1

n.d.

Tlr1328, Tlr0408, Tll1935

Tlr0416, Tlr0221

Synechocystis sp. PCC 6803

Sll1077, Sll0228

Slr1022

Sll1561, Slr0370, Slr0091

Gloeobacter violaceus PCC 7421

n.d.

Glr0547, Glr3849, Gll2223

Glr2755, Glr3848, Gll1504, Gll2805

Nostoc sp. PCC 7120

Alr2310

Alr2398, Alr1080, All0396

Alr0540, Alr3771, All3556, All5022

Nostoc punctiforme PCC 73102

Npun02002114

Npun02005728, Npun02001164, Npun02001509

Npun02003702, Npun02006572, Npun02002895, Npun02002692

Anabaena variabilis ATCC 29413

Ava_0127

Ava_0214, Ava_3730, Ava_2839

Ava_2942, Ava_1554, Ava_3534, Ava_2258

  1. N.d. = not detected.