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Table 4 tRNA gene copy number vs total number of codons in fungi

From: Codon-triplet context unveils unique features of the Candida albicans protein coding genome

 

tRNA gene copy number

total codons

A.fumigatus

163

3842897

C.albicans

131

2939109

C.glabrata

207

2525088

D.hansenii

205

2796378

E.gossypii

169

2220107

K.lactis

162

2397264

S.bayanus

274

1811749

S.cerevisiae

273

2804657

S.mikatae

251

1698131

S.paradoxus

200

2132879

S.pombe

156

2062840

  1. Complete genome sequences of the 11 fungal species studied were used to extract tRNA sequences using tRNAscan-SE (see Methods). The total number of different tRNA gene sequences retrieved was compared with the total number of codons. C. albicans (bold) had the smallest set of tRNA genes, but was the second largest ORFeome.
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BMC Genomics

ISSN: 1471-2164

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