Skip to main content
Figure 3 | BMC Genomics

Figure 3

From: Restriction Landmark Genomic Scanning (RLGS) spot identification by second generation virtual RLGS in multiple genomes with multiple enzyme combinations

Figure 3

Sequence characteristics surrounding the NotI site of extra spots and real spots. Analysis of 200 bp + and – the NotI site for 120 extra spots and 600 real spots from the human NotI-EcoRV-HinfI RLGS profile was performed. In all four charts, data for the extra spots is shown in pink and data for real spots is shown in blue. The Y axes for all are the percentage of the class of spots showing the measure indicated on the X axis A) Measures of GC content. B) Observed/expected CpG ratio. C) Number of CpGs. D) The percentage of spots retain after eliminating all spots that fail to meet the three indicated criteria. The boxed data points show the percentage of real and extra spots retained when all spots that fail to meet all three of the following criteria are eliminate: 50%

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us