Table 2 Protein domains of genes identified by RaSH
From: Impact of light on Hypocrea jecorina and the multiple cellular roles of ENVOY in this process
Gene | Amino acids | Protein domain | E-value | % aligned | Position |
|---|---|---|---|---|---|
cpc2 | 292 | WD40 | 2.0E-60 | 93.1% | 3–286 |
phr1 | 591 | Deoxyribodipyrimidine photolyase | 7.0E-124 | 99.3% | 96–584 |
|  |  | FAD_binding_7 | 2.0E-97 | 100% | 316–587 |
rpl7 | 248 | Ribosomal_L7 | 5.0E-66 | 100% | 88–247 |
|  |  | Ribosomal_L30 | 2.0E-14 | 100% | 87–139 |
ubi4 | 305 | Ubiquitin | 7.0E-33 | 100% | 1–76 |
|  |  | Ubiquitin | 7.0E-33 | 100% | 77–152 |
|  |  | Ubiquitin | 7.0E-33 | 100% | 153–228 |
|  |  | Ubiquitin | 7.0E-33 | 100% | 229–304 |
tre9347 | 700 | NAD_synthase | 3.0E-59 | 99.2% | 328–653 |
|  |  | Carbon-nitrogen hydrolase | 1.0E-18 | 100% | 6–201 |
|  |  | Predicted amidohydrolase | 4.0E-27 | 91.6% | 5–282 |
tre10571 | 534 | Major facilitator superfamily MFS_1 | 4.0E-12 | 100% | 31–443 |
|  |  | Arabinose efflux permease | 7.0E-13 | 46.7% | 26–208 |
|  |  | Fungal trichothecene efflux pump (TRI12) | 2.0E-06 | 34.3% | 102–303 |
tre16112 | 304 | Hydroxybenzoate polyprenyltransferase | 2.0E-32 | 99.7% | 2–289 |
|  |  | UbiA prenyltransferase family | 5.0E-23 | 100% | 24–301 |
tre20863 | 648 | Succinate dehydrogenase/fumarate reductase | 2.0E-168 | 100% | 56–631 |
|  |  | FAD binding domain | 2.0E-140 | 99.4% | 162–492 |
|  |  | Aspartate oxidase | 1.0E-92 | 93.8% | 85–618 |
|  |  | Fumarate reductase/succinate dehydrogenase flavoprotein C-terminal domain | 4.0E-44 | 100% | 513–648 |
tre22454 | 180 | NTPase/HAM1 | 1.0E-54 | 100% | 5–178 |
|  |  | Xanthosine triphosphate pyrophosphatase | 2.0E-45 | 96.9% | 5–180 |
tre22667 | 193 | Ribosomal protein L6P/L9E | 4.0E-30 | 97.2% | 1–187 |
|  |  | Ribosomal protein L6 | 7.0E-07 | 100% | 97–180 |
tre31929 | 270 | Adenylate kinase | 3.0E-75 | 100% | 44–231 |
|  |  | Adenylate kinase, active site lid | 2.0E-12 | 100% | 167–202 |
tre35050 | 104 | - | - | - | - |
tre39031 | 711 | Peptidase_M49 | 6.0E-170 | 98.8% | 143–709 |
tre39397 | 465 | Sugar (and other) transporter | 7.0E-13 | 87.1% | 44–462 |
tre40105 | 331 | - | - | - | - |
tre41865 | 183 | Perilipin | 2.0E-04 | 27.4% | 15–110 |
tre42719 | 537 | IMP dehydrogenase/GMP reductase domain | 1.0E-159 | 99.4% | 42–526 |
|  |  | CBS domain | 3.0E-13 | 93.2% | 130–236 |
|  |  | Predicted transcriptional regulator | 7.0E-09 | 36.7% | 130–238 |
|  |  | NAD(P)H-dependent flavin oxidoreductase (oxidored) FMN-binding superfamily domain | 1.0E-04 | 99.1% | 195–397 |
tre45629 | 356 | Porphyromonas-type peptidyl-arginine deiminase | 1.0E-67 | 100% | 6–353 |
tre72859 | 114 | - | - | - | - |