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Table 2 C M-specific genes obtained by use of the Welch t test and a Bonferroni correction

From: Gene expression analysis reveals early changes in several molecular pathways in cerebral malaria-susceptible mice versus cerebral malaria-resistant mice

IDa Cluster Symbolb Name Chrc Welch t testd
BG083931 A Slc25a11 Solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 11 D2 ... ...
718084 A Dfy Duffy blood group 1 D2 ... ...
BG064714 A Slc3a2 Solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 19 D2 ... ...
573549 A Mrps34 Mitochondrial ribosomal protein S34 17 D2 D5 ...
641184 A Cdc37l1 Cell division cycle 37 homolog (S. cerevisiae)-like 19 D2 D5e ...
641058 A Nfkbia Nuclear factor of kappa light chain gene enhancer in B-cells inhibitor, alpha 12 ... D5 D7
BG086014 A Hmgn1 High mobility group nucleosomal binding domain 1 16 D2 D5 ...
639606 A E030041M21Rik RIKEN cDNA E030041M21 gene 10 D2f D5 ...
636468 A Epb4.1l3 Erythrocyte protein band 4.1-like 3 17 ... D5 ...
BG084377 A Stat3 Signal transducer and activator of transcription 3 11 D2 ... ...
582660 A Tagap1 T-cell activation GTPase activating protein 1 17 D2 D5 D7
573243 B Ddi2 DNA-damage inducible protein 2 4 ... D5 ...
BG071164 B 2310008M10Rik RIKEN cDNA 2310008M10 gene 3 D2 ... D7
BG070859 B Nipbl Nipped-B homolog (Drosophila) 15 ... D5e D7
639002 B Mlx MAX-like protein X 11 D2 D5 D7
BG072955 B Myo5a Myosin Va 9 ... ... D7
575433 B Ptger1 Prostaglandin E receptor 1 (subtype EP1), 42 kD 8 ... ... D7
BG087138 B Itsn2 Intersectin 2 12 D2 ... D7
BG078795 B Hspa5 Heat shock 70 kD protein 5 (glucose-regulated protein) 2 ... ... D7
BG064608 B Calr Calreticulin 8 ... ... D7
BG087169 B P4hb Protein disulfide isomerase associated 6 12 ... ... D7
764825 B Reln Reelin 5 D2 ... ...
1263789 B Cxcl12 Chemokine (C-X-C motif) ligand 12 6 D2 ... ...
441212 B Atp6v1g2 ATPase, H+ transporting, lysosomal 13 kD, V1 subunit G isoform 2 17 D2 ... ...
577991 B Zdhhc6 Zinc finger, DHHC domain containing 6 19 ... D5 ...
1263101 B Hmgcs1 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 13 ... D5 ...
573257 B Pcgf3 Polycomb group ring finger 3 5 ... ... D7
436894 B Fabp7 Fatty acid binding protein 7, brain 10 ... ... D7
BG076809 C Rps18 Ribosomal protein S18 17 D2 ... ...
BG085025 C Dab1 Disabled homolog 1 (Drosophila) 4 ... D5 ...
718873 C S100a10 S100 calcium binding protein A10 (calpactin) 3 D2 D5 ...
576647 C Chchd1 Coiled-coil-helix-coiled-coil-helix domain containing 1 14 D2 D5 ...
BG063799 C Ak3l1 Adenylate kinase 3 alpha-like 1 4 ... ... D7
BG077012 C Cdc6 Cell division cycle 6 homolog (S. cerevisiae) 11 D2 D5 ...
BG077054 C Ncbp2 Nuclear cap binding protein subunit 2, 20 kDa 16 D2 ... ...
BG062969 C Hnrpdl Heterogeneous nuclear ribonucleoprotein D-like 5 D2 ... ...
576635 C Vcam1 Vascular cell adhesion molecule 1 3 D2 ... ...
402711 C Crybb1 Crystallin, beta B1 5 ... ... D7
BG080965 C Prkcbp1 Protein kinase C binding protein 1 2 ... ... D7
BG074422 C Itgb1 Integrin beta 1 (fibronectin receptor beta) 8 ... D5 ...
BG084605 C Bpgm 2,3-bisphosphoglycerate mutase 6 D2 ... ...
BG078316 C Sfxn1 Sideroflexin 1 13 ... ... D7
BG076061 C Lyar Ly1 antibody reactive clone 5 ... ... D7
BG077320 C Mrps10 Mitochondrial ribosomal protein S10 17 D2 ... ...
BG077670 C Gnai2 Guanine nucleotide binding protein, alpha inhibiting 2 9 D2 ... D7
406838 C Foxo3a Forkhead box O3a 10 ... ... D7
BG072299 C Ramp2 Receptor (calcitonin) activity modifying protein 2 19 ... ... D7
1224916 C Atxn7 Ataxin 7 14 D2 ... ...
1395654 C Batf Basic leucine zipper transcription factor, ATF-like 12 D2 D5 ...
BG087349 C Aldh1b1 Aldehyde dehydrogenase 1 family, member B1 4 D2 ... ...
596637 C Stab2 Stabilin 2 10 D2 ... ...
596064 C Cd5 CD5 antigen 19 D2 ... ...
573880 C Nfyc Nuclear transcription factor-Y gamma 4 D2 ... ...
1226020 C Unknown Unknown ... D2 ... D7
400157 C Uqcrq Ubiquinol-cytochrome c reductase binding protein 11 ... ... D7
BG086406 C Agtr2 Angiotensin II receptor, type 2 X ... ... D7
582804 C Cys1 Cystin 1 12 ... D5 ...
576480 C Igf2bp3 Insulin-like growth factor 2 mRNA binding protein 3 6 D2 D5 ...
464586 C Srr Serine racemase 11 D2 ... ...
575610 C 2700085E05Rik RIKEN cDNA 2700085E05 gene 11 D2 ... ...
575040 C Sel1h Sel1 (suppressor of lin-12) 1 homolog (C. elegans) 12 D2 ... ...
BG087165 C Herc4 Hect domain and RLD 4 10 D2 ... D7
BG073254 C Rbmxrt RNA binding motif protein, X chromosome retrogene 8 D2 ... ...
BG073981 C Gtpbp8 GTP-binding protein 8 (putative) 16 ... D5 D7
573285 C Lrriq2 Leucine-rich repeats and IQ motif containing 2 16 D2 ... ...
372621 C Icam5 Intercellular adhesion molecule 5, telencephalin 9 ... ... D7
1428894 C Ptpns1 Protein tyrosine phosphatase, non-receptor type substrate 1 2 ... ... D7
BG076772 C Gpd2 Glycerol phosphate dehydrogenase 2, mitochondrial 2 ... ... D7
752149 C Stk16 Serine/threonine kinase 16 1 ... D5 D7
573328 C Thrsp Thyroid hormone responsive SPOT14 homolog (Rattus) 7 ... D5 D7
BG087431 C Sec31a SEC31 homolog A (S. cerevisiae) 5 D2 ... ...
BG087401 C Brd7 Bromodomain-containing 7 8 D2 D5 D7
1361813 C Mmachc Methylmalonic aciduria cblC type, with homocystinuria 4 D2 ... ...
BG076501 C Sfrs6 Splicing factor, arginine/serine-rich 6 2 ... ... D7
1243669 C Aldoa Aldolase 1, A isoform 7 ... D5 ...
476643 C Sez6l Seizure related 6 homolog like 5 D2 ... ...
BG075757 C Cd81 CD 81 antigen 7 D2 ... ...
574496 C Usp19 Ubiquitin specific peptidase 19 9 D2 D5f ...
BG065688 C Uba52 Ubiquitin A-52 residue ribosomal protein fusion product 1 8 ... ... D7
BG078688 C Dtnb Dystrobrevin, beta 12 ... ... D7
BG086001 C Sv2a Synaptic vesicle glycoprotein 2 a 3 ... ... D7
BG073641 C Rpl27 Ribosomal protein L27 11 D2 ... ...
BG087402 C Hnrpu Heterogeneous nuclear ribonucleoprotein U 1 ... ... D7
595925 C Sell Selectin, lymphocyte 1 D2 ... ...
1345776 C Rbm14 RNA binding motif protein 14 19 ... ... D7
BG077327 C Gins4 GINS complex subunit 4 (Sld5 homolog) 8 D2 D5 ...
387319 C Zfp346 Zinc finger protein 346 13 D2e ... D7
AW546565 C Exosc7 Exosome component 7 9 ... ... D7
BG072456 C Pih1d1 PIH1 domain containing 1 7 ... ... D7
BG074521 C Npm1 Nucleophosmin 1 11 D2 ... ...
BG085278 C Rpl22 Ribosomal protein L22 4 D2e D5 D7
1445843 C Ahcyl1 S-adenosylhomocysteine hydrolase-like 1 3 D2 ... D7
BG087592 C Fbxw7 F-box and WD-40 domain protein 7, archipelago homolog (Drosophila) 3 D2 D5e D7
BG064589 C Atp6v1a1 ATPase, H+ transporting, lysosomal 70 kD, V1 subunit A, isoform 1 16 D2 ... D7
441227 C Abtb1 Ankyrin repeat and BTB (POZ) domain containing 1 6 D2 D5 ...
386911 C Trim29 Tripartite motif protein 29 9 ... ... D7
BG087083 C Serinc3 Serine incorporator 3 2 D2 ... ...
372340 C Myod1 Myogenic differentiation 1 7 D2 ... ...
BG081915 C Ube3a Ubiquitin protein ligase E3A 7 D2 D5 ...
573124 C Mrrf Mitochondrial ribosome recycling factor 2 D2 D5 ...
573230 C 4930455C21Rik RIKEN cDNA 4930455C21 gene 16 ... ... D7
1243507 C Unknown Unknown ... D2 D5 D7
BG065706 C Rabl3 RAB, member of RAS oncogene family-like 3 16 ... ... D7
BG078879 C Cox4i1 Cytochrome c oxidase, subunit IVa 8 D2 ... ...
BG088493 C Ptplad1 Protein tyrosine phosphatase-like A domain containing 1 9 ... ... D7
1378435 C Acad8 acyl-Coenzyme A dehydrogenase family, member 8 9 D2 ... ...
1429286 C 1600002K03Rik RIKEN cDNA 1600002K03 gene 10 ... D5 ...
BG078872 C Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 1 ... D5 ...
420477 C Col13a1 Procollagen, type XIII, alpha 1 10 D2 ... ...
402631 C Crebl1 cAMP responsive element binding protein-like 1 17 ... D5 ...
1445700 C 4930506M07Rik RIKEN cDNA 4930506M07 gene 19 D2e ... D7
575274 C Nvl Nuclear VCP-like 1 D2 ... D7
574369 C Il4 Interleukin 4 11 D2 D5 D7
BG071511 C Suclg1 Succinate-CoA ligase, GDP-forming, alpha subunit 6 D2 ... D7
573178 C Igfbp7 Insulin-like growth factor binding protein 7 5 ... D5 ...
574126 C Dnaja3 DnaJ (Hsp40) homolog, subfamily A, member 3 16 D2 ... D7
1226596 C Fem1c fem-1 homolog c (C.elegans) 18 D2e D5 D7
BG087153 C Bckdha Branched chain ketoacid dehydrogenase E1, alpha polypeptide 7 D2e D5 D7
402019 C Golga7 Golgi autoantigen, golgin subfamily a, 7 8 D2e ... D7
574168 C Prosc Proline synthetase co-transcribed 8 D2e D5 D7
BG073436 C Atp5b ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit 10 D2e D5 D7
574027 C Med19 Mediator of RNA polymerase II transcription, subunit 19 homolog (yeast) 2 D2 D5 ...
1243989 C Mfhas1 Malignant fibrous histiocytoma amplified sequence 1 8 D2 D5 D7
373233 C Itgb5 Integrin beta 5 16 ... ... D7
BG085816 C Spna2 Alpha-spectrin 2, brain 2 ... ... D7
1446130 C 2410166I05Rik RIKEN cDNA 2410166I05 gene 4 D2 ... D7
1263575 C Stard4 StAR-related lipid transfer (START) domain containing 4 18 D2 D5 ...
1852943 C Ankrd17 Gene trap ankyrin repeat 5 ... ... D7
389112 C Palm Paralemmin 10 ... ... D7
619816 C Smad5 MAD homolog 5 (Drosophila) 13 ... ... D7
641790 C BC023814 cDNA sequence BC023814 3 ... ... D7
1329743 C S3–12 Plasma membrane associated protein, S3–12 17 ... ... D7
653795 C Il4ra Interleukin 4 receptor, alpha 7 D2 ... D7
640435 C Igsf3 Immunoglobulin superfamily, member 3 3 ... ... D7
387990 C 0610040D20Rik RIKEN cDNA 0610040D20 gene 9 D2 D5 ...
BG075962 C Peci Peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase 13 D2 ... ...
BG086412 C Rpl31 Ribosomal protein L31 1 D2 ... ...
BG075914 C Rps9 Ribosomal protein S9 7 D2 ... ...
639852 C Bsg Basigin 10 D2 ... ...
573106 C Slc25a1 Solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 16 D2 ... D7
574123 C Suds3 Suppressor of defective silencing 3 homolog (S. cerevisiae) 5 D2 ... ...
BG088819 C 1810043G02Rik RIKEN cDNA 1810043G02 gene 10 D2 ... ...
BG088858 C 1810044A24Rik RIKEN cDNA 1810044A24 gene 15 D2 D5 D7
BG078275 C C230096C10Rik RIKEN cDNA C230096C10 gene 4 D2 ... D7
573120 C 2310035K24Rik RIKEN cDNA 2310035K24 gene 2 D2 D5 ...
BG076791 C Eef1d Eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 15 D2 ... ...
BG087946 C Ubtf Transcription factor UBF 11 D2 D5f D7
372316 C Ly6h Lymphocyte antigen 6 complex, locus H 15 D2 ... D7
1243611 C Tmem23 Transmembrane protein 23 19 D2 D5 D7
574299 C 2700059D21Rik RIKEN cDNA 2700059D21 gene 4 ... D5 D7
BG064820 C Sae1 SUMO1 activating enzyme subunit 1 7 D2 ... ...
BG071827 C Ppm1b Protein phosphatase 1B, magnesium dependent, beta isoform 17 D2 D5f ...
BG086606 C Txndc12 Thioredoxin domain containing 12 (endoplasmic reticulum) 4 D2 ... ...
BG085962 C Gsn Gelsolin 2 D2 ... ...
575308 C Dus3l Dihydrouridine synthase 3-like (S. cerevisiae) 17 ... ... D7
573228 C Fyco1 FYVE and coiled-coil domain containing 1 9 D2 D5 ...
BG081532 C Sfpq Splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) 4 D2 D5f D7f
BG072614 C Rps16 Ribosomal protein S16 7 D2 ... ...
BG078928 C Stmn3 Stathmin-like 3 2 ... ... D7
1226306 C Cd274 CD274 antigen 19 D2 D5 ...
AW544628 C Itgb1 Integrin beta 1 (fibronectin receptor beta) 8 D2 ... D7
BG087322 C Rps6ka2 Ribosomal protein S6 kinase, 90 kD, polypeptide 2 17 D2 D5 ...
641964 C Cd4 CD4 antigen 6 D2 D5f ...
BG071505 C Slc28a3 Solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 13 D2 D5 ...
BG088775 C Znhit3 Zinc finger, HIT type 3 11 D2 D5 ...
BG069977 C Pmm1 Phosphomannomutase 1 15 D2 D5 ...
574022 E 1200015M12Rik RIKEN cDNA 1200015M12 gene 3 D2 ... ...
BG086286 E Cirbp Cold inducible RNA binding protein 10 D2 ... ...
598493 E Ifit3 Interferon-induced protein with tetratricopeptide repeats 3 19 D2 D5 ...
617022 " " " " " " "
1329893 E 2600010E01Rik RIKEN cDNA 2600010E01 gene 2 ... ... D7
BG076479 E Ctla2a Cytotoxic T lymphocyte-associated protein 2 alpha 13 ... D5f D7
BG088327 E Sf3b1 Splicing factor 3b, subunit 1, 155 kDa 1 ... D5 ...
BG076355 E Stat3 Signal transducer and activator of transcription 3 11 D2 ... ...
643048 E Gbp6 Guanylate binding protein 6 3 ... D5 ...
638199 E H2-T22 Histocompatibility 2, T region locus 22 17 D2 D5f ...
638232 E Jundm2 Jun dimerization protein 2 12 D2 D5 ...
1394984 E Rps14 Ribosomal protein S14 18 ... ... D7
  1. a Clone ID or GenBank accession no.
  2. b The genes Il4ra and Ifit3 were duplicates (the same clone for the gene Il4ra and two different clones for the gene Ifit3). Thus, there were 177 genes identified.
  3. c Chromosomal localization.
  4. d The days for which the Welch t test was significant (<0.0001) after Bonferroni correction are mentioned.
  5. e Significant difference was observed only between BALB/c and C57BL/6.
  6. f Significant difference was observed only between BALB/c and CBA/J.