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Table 4 Features and annotations of the 8 new Alpha-proteobacterial sRNAs of S. meliloti

From: Identification of chromosomal alpha-proteobacterial small RNAs by comparative genome analysis and detection in Sinorhizobium meliloti strain 1021

 

sra03

sra25

sra30

sra32

sra33

sra34

sra41

sra56

Flanking genes

polA-Y02851

Y00034-96

Y01755-aspS

Y01933-proS

celR2-rpmG

tufB-Y01325

Y01226-25

Y03975-76

Orientation

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Estimated size(s) (nt)

120

144

104

133

76

76

106 & 68

127

R. etli CFN 42

•

•

-

•

•

-

•

•

R. leguminosarum

•

•

-

•

•

-

•

•

A. tumefaciens C58/C

•

•

-

•

•

-

•

•

A. tumefaciens C58/W

•

-

-

•

•

-

•

•

M. loti MAFF

-

-

-

•

•

-

•

•

B. suis

-

-

-

-

-

-

-

•

B. melitensis

-

-

-

-

-

-

-

•

B. abortus

-

-

-

-

-

-

-

•

Possible functions

UD

UD

UD

Antisense

Antisense

Antisense

Antisense

6S

  1. UD : undetermined
  2. Dot (•) represents e-values > 10e-4