Skip to main content

Table 5 List of ORFs originally identified as specific for the North American Xylella fastidiosa (Xf) strains Ann-1 and Dixon, whose sequences have been found in the genomes of the Xf strains used in this study. The presence of sequences related to each ORF in the genomes of the strains analyzed by us is marked by an X.

From: Comparative genomic characterization of citrus-associated Xylella fastidiosa strains

ORFa Identified in this study as Putative function 187b 56a 9.12c Cv21 Fb7 36f
Ann FY0184 GOE #17 Transcriptional regulator AbrB X X    X  
Ann FY0185 GOE #127 Conserved hypothetical protein     X   
Ann FY0934 GOE #19 Putative transposase TnA X X     
Ann FY0977 GOE #133 Conjugation TrbI-like protein     X   
Ann FY0978 GOE #23 Conserved hypothetical protein X   X    
Ann FY0979 GOE #16 Resolvase, N-terminal:Resolvase helix-turn-helix region   X   X   
Ann FY0983 GOE #20 Helix-turn-helix motif X X X X   
Ann FY0984 GOE #42 Conjugal transfer protein TrbG/VirB9/CagX   X X X   
Ann FY0985 GOE #52 Conserved hypothetical protein X X   X   
Ann FY0988 GOE #30 VirB8 X X   X   
Ann FY0989 GOE #02 TrbL/VirB6 plasmid conjugal transfer protein X X X X   X
Ann FY0992 GOE #63 Plasmid-related exported protein     X   X
Ann FY0993 GOE #26 Transferase hexapeptide repeat X   X X   
Ann FY0996 GOE #07 Probable conjugal transfer protein TraL X X X    X
Ann FY0997 GOE #59 Conserved hypothetical protein   X X X   X
Ann FY1071 GOE #56 Conserved hypothetical protein X X X X X X
Ann FY2430 GOE #68 Conserved hypothetical protein    X X   
Ann FY2499 GOE #62 Conserved hypothetical protein    X    X
Ann FY2513 GOE #116 Helix-turn-helix motif:Peptidase S24, S26A and S26B X      
Ann FY2526 GOE #31 type IV secretory pathway, VirB3 family protein   X X X   
Ann FY2545 GOE #12 Conserved hypothetical protein    X X   
Ann FY2555 GOE #70 Conserved hypothetical protein     X   X
Ann FY3510 GOE #43 SpoVT/AbrB-like   X X    
Dixon FX0341 GOE #71 Helix-turn-helix motif: Peptidase S24, S26A and S26B    X X   
Dixon FX2654 GOE #107 Putative plasmid conjugal transfer protein TraJ      X  
Dixon FX3105 GOE #96 Conserved hypothetical protein      X  
  1. a As described by Doddapaneni and coworkers [22].