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Table 1 Immunity related bandicoot ESTs

From: Analysis of a set of Australian northern brown bandicoot expressed sequence tags with comparison to the genome sequence of the South American grey short tailed opossum

Clone IDa Gene # % Identity Species Match Positionsb Accession
T cell receptor complex
T013A03 TCRA 1 67 Rat 323–429 EE744980
T004C05 TCRB 12 90 Possum 15–167 EE744328
T005B12 TCRG 2 79 Tammar 33–92 EE744394
T005G01 TCRM* 6     EE744440
TImA207 CD3 epsilon 1 89 Tammar 107–189 EE745132
Antigen processing genes
T011C11 MHC Class I 5 86 Possum 276–362 EE744882
T002B03 β2-microglobulin 5 92 Possum 21–122 EE745008
T002C02 MHC Class II 5 91 RN Wallaby 1–170 EE745063
T013D11 MHC Class II invariant chain (CD74) 2 77 Human 17–151 EE745023
T004A10 CD1 1 68 Human 12–83 EE744315
T010D03 BAT5 1 86 Cow 4–132 EE744822
TImA41 Proteasome activator complex 1 89 Mouse 115–249 EE743939
T005D01 Proteasome subunit beta type 9 1 84 Mouse 138–209 EE744406
TImA129 Proteasome subunit beta type 8 1 88 Human 249–273 EE745081
TImA698 Proteasome subunit beta type 10 2 98 Cow 104–277 EE744154
B cell receptor complex
TImA501 Immunoglobulin heavy chain 2 84 Possum 278–397 EE744016
TImA494 Immunoglobulin lambda light chain 4 77 Possum 119–238 EE744009
TImA88 Immunoglobulin kappa light chain 1 86 Possum 16–146 EE744775
T010A10 CD79a 1 68 Mouse 28–133 EE744794
Cytokine receptors
T012F10 Interleukin-18 receptor 1 57 Pig 17–97 EE744958
T002E04 Interferon-gamma receptor 1 2 57 Dog 372–466 EE745141
T008H12 Lymphotoxin beta receptor 1 65 Dog 223–362 EE744702
T013C12 Tumor necrosis factor receptor member 1 61 Dog 355–438 EE745012
Innate immunity related genes
T005D05 Complement component 3 1 89 Tammar 1156–1651 EE744408
T004A09 Proteoglycan core protein 1 56 Chicken 1–96 EE744314
TImA656 Glioma pathogenesis protein 1 66 Human 150–214 EE744127
T007B06 Cathelicidin antimicrobial peptide 1 61 Dog 15–127 EE744556
Signal transduction molecules involved in lymphocyte development and function
T010D12 CD45 1 49 Horse 1–81 EE744831
TImA137 CD37 1 65 Dog 24–70 EE745088
T008G06 CD53 1 65 Mouse 185–219 EE744685
T005F04 CD147 1 71 Cow 142–230 EE744430
T009G02 SH3 protein expressed in lymphocytes 1 79 Mouse 79–210 EE744765
T007G10 Src-like adaptor protein 2 1 69 Cow 160–273 EE744600
T005F01 NF-κB inhibitor beta 1 81 Dog 253–296 EE744428
Function Unknown
T004E12 Interferon induced protein 1 72 Rat 9–141 EE744349
  1. a. Only clones that showed the lowest E value are shown for non-singletons
  2. b. Amino acid positions showing the highest similarity to the clone
  3. * Previously described as a divergent TCRD [50].