Table 3 Percentage of LOH determined for copy neutral, copy gain and copy loss events.
| Â | % LOH | |||||
|---|---|---|---|---|---|---|
| Â | Copy neutral | Gain | Loss | |||
Cell line | SNP (%) | CGH (%) | SNP (%) | CGH (%) | SNP (%) | CGH (%) |
CSCC1 | 25.7 | 30.4 | 43.9 | 41.8 | 30.3 | 27.7 |
CSCC7 | 17.5 | 19.8 | 12.8 | 14.1 | 69.6 | 66.0 |
CC8 | 79.1 | 78.5 | 19.0 | 15.3 | 1.7 | 6.2 |
CC10A | 62.7 | 77.6 | 5.9 | 7.9 | 31.3 | 14.4 |
CC10B | 52.3 | 59.6 | 12.5 | 14.2 | 35.2 | 26.2 |
CC11- | 80.1 | 80.7 | 14.7 | 14.9 | 5.2 | 4.4 |
CC11+ | 83.6 | 86.1 | 5.5 | 5.5 | 10.9 | 8.4 |
CasKi | 53.4 | 60.0 | 20.5 | 26.6 | 26.0 | 13.7 |
SiHa | 54.6 | 54.2 | 8.1 | 11.5 | 34.3 | 37.3 |
HeLa | 63.3 | 74.1 | 25.8 | 16.6 | 10.9 | 9.4 |
Average | 57.2 | 62.1 | 16.9 | 16.8 | 25.5 | 21.4 |