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Table 1 Genes comprising the bovine BPI-like locus

From: Expansion of the Bactericidal/Permeability Increasing-like (BPI-like) protein locus in cattle

Gene Alt. Names1 Access. Number cDNA length(bp) length aa pred. MW # exons start of first exon end of last exon % aa identity2
BPIL1 LPLUNC2, Z ENSBTAG000000192003,7 1380 459 49 15 145,091 163,442 73 (h), 63 (m)
BPIL3 LPLUNC6, Y XM_5967625,7 1332 443 49 17 168,578 187,389 79 (h), 68 (m)
RYA3 LPLUNC3 XM_6002935,7 1434 477 50 15 196,342 213,257 80 (h), 82 (m)
RY2G5 LPLUNC4 XM_5939195,7 1722 574 60 15 222,648 256,128 84 (h), 85 (m)
XM_595323   XM_595323 362 121 13 3 301,883 304,761  
BSP30A   NM_174803 976 239 26 9 343,495 354,041  
BSP30C   TC2770474,7 1180 251 28 8 374,201 383,493  
BSP30D   Genescan6,7 694 231 25 6 421,589 432,785  
BSP30B   NM_174802 980 240 27 9 453,354 463,730  
BASE Latherin Genescan6,7 687 229 26 7 484,319 495,374 42 (h)
SPLUNC3 X DQ677839 1029 239 27 7 516,034 527,454 67 (h), 63 (m)
PLUNC SPLUNC1 NM_174426 1049 255 26 9 536,029 543,093 73 (h), 65 (m)
VEMSGP LPLUNC1 NM_174697 1624 473 52 15 573,091 594,293 56 (h), 49 (m)
LPLUNC5   Genescan6,7 1551 517 57 15 600,122 618,771 50 (h), 59 (m)
  1. (1) [10, 19]
  2. (2) Amino acid sequence identity obtained using ClustalW against either the human (h) or mouse (m) ortholog.
  3. (3) Ensembl database [34]
  4. (4) TIGR database [35]
  5. (5) Bovine RefSeq predicted coding sequence trimmed to align with human and mouse homologs
  6. (6) Predicted cDNA sequence generated from genomic contig using Genescan)
  7. (7) See supplementary material sTable 1 for final nucleotide and amino acid sequences used in the analyses