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Figure 3 | BMC Genomics

Figure 3

From: A sequence based synteny map between soybean and Arabidopsis thaliana

Figure 3

Panel (A) A Synteny map of soybean sequences compared to A. thaliana genomic sequence. The region displayed is from A. thaliana chromosome V, 15,000,000 – 17,250,000 bp. Solid chromosomal segments represent reported A. thaliana genes, described in light text. All "gi" features are soybean ESTs, All "H" or "B" features represent bacterial artificial chromosome (BAC) end sequence. Map display created in MapChart and exported in enhanced metafile format. Each vertical segment is equivalent to 250,000 bp of A. thaliana DNA. Panel (B) is an expanded view of the 15,400,000 to 15,500,000 bp region. Panel (C) is a Clustal alignment of soybean ESTs (gi #'s) listed in Panel b. Varieties listed are: gi14011701 (Williams 82); gi4306793 (Williams); gi17400922 (PI 567374); gi10846448 (Williams 82); gi16347707 (Williams); gi18735497 (Jack); gi18733028 (Raiden). Single nucleotide polymorphisms are apparent at base pair locations 337, 398, 404 and 423 in panel C.

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