|
(a) Proteins specific to Methanoarchaeota
|
|---|
|
MMP0001
|
[NP_987121]
|
COG4014
|
MMP1346
|
[NP_988466]
|
MtrX
|
COG4002
|
|
MMP00215
|
[NP_987141]
|
COG4079
|
MMP1555
|
[NP_988675]
|
MCR_B
|
CDD25889
|
|
MMP0143
|
[NP_987263]
|
COG4069
|
MMP1556
|
[NP_988676]
|
MCR_D
|
CDD3015
|
|
MMP0154
|
[NP_987274]
|
COG4070
|
MMP1557
|
[NP_988677]
|
MCR_C
|
CDD15906
|
|
MMP03115
|
[NP_987431]
|
COG4048
|
MMP1558
|
[NP_988678]
|
MCR_G
|
CDD29638
|
|
MMP0312
|
[NP_987432]
|
COG4050
|
MMP1559
|
[NP_988679]
|
MCR_A
|
CDD8362
|
|
MMP0337
|
[NP_987457]
|
COG4029
|
MMP1560
|
[NP_988680]
|
MtrE
|
CDD9765
|
|
MMP0421
|
[NP_987541]
|
COG4052
|
MMP1561
|
[NP_988681]
|
MtrD
|
CDD9766
|
|
MMP05635
|
[NP_987683]
|
COG4090
|
MMP1562
|
[NP_988682]
|
MtrC
|
CDD17461
|
|
MMP0642
|
[NP_987762]
|
COG4020
|
MMP1563
|
[NP_988683]
|
MtrB
|
CDD23666
|
|
MMP0656
|
[NP_987776]
|
COG4051
|
MMP15644
|
[NP_988684]
|
MtrA
|
COG4063
|
|
MMP0665
|
[NP_987785]
|
COG4066
|
MMP1566
|
[NP_988686]
|
MtrG
|
CDD9769
|
|
MMP06985
|
[NP_987818]
|
COG4033
|
MMP1593
|
[NP_988713]
|
COG1571
| |
|
MMP07015
|
[NP_987821]
|
COG4081
|
MMP1644
|
[NP_988764]
|
COG4022
| |
|
MMP1223
|
[NP_988343]
|
COG4065
|
MMP1704
|
[NP_988824]
|
COG4008
| |
|
MMP13095
|
[NP_988429]
|
COG4073
| | | | |
|
(b) Proteins specific to all methanogen and A. fulgidus
|
|
MMP0372
|
[NP_987492]
|
MTD CDD2518
|
MMP0962
|
[NP_988082]
|
COG4855
| |
|
MMP04001
|
[NP_987520]
|
COG1707
|
MMP09765
|
[NP_988096]
|
COG1810
| |
|
MMP04995
|
[NP_987619]
|
ArsR CDD28947
|
MMP09845
|
[NP_988104]
|
CO_dh
|
CDD3060
|
|
MMP06072
|
[NP_987727]
|
NrpR COG1693
|
MMP14995
|
[NP_988619]
|
HTH
|
COG4800
|
|
MMP09615
|
[NP_988081]
|
CDD15263
|
MMP15673
|
[NP_988687]
|
MtrH
|
CDD25859
|
|
(c) Proteins specific to some methanogen and A. fulgidus
|
|
Mbur_0042
|
[YP_564815]
| |
Mbur_0546
|
[YP_565273]
| | |
|
Mbur_0348
|
[YP_565093]
| |
Mbur_0652
|
[YP_565373]
| | |
|
Mbur_0350
|
[YP_565095]
| |
Mbur_0992
|
[YP_565682]
| | |
|
Mbur_0545
|
[YP_565272]
| |
Mbur_1754
|
[YP_566394]
|
CDD48145
| |
|
Mbur_0387
|
[YP_565131]
|
CDD28974
|
Mbur_1911
|
[YP_566543]
| | |
- The protein ID number starting with Mbur represents query protein from the genome of M. burtonii. "=" means paralogous genes.
- Note 1. A homolog to MMP0400 is found in Solibacter usitatus Ellin6076 and Rubrobacter xylanophilus DSM 9941;
- Note 2. A homolog to MMP0607 is found in Dehalococcoides sp. CBDB1 and D. ethenogenes 195;
- Note 3. A homolog to MMP1567 is found in 2 Desulfitobacterium hafniense strains (Firmicutes), and the CmuB protein from 3 species belonging to Rhizobiales of α-proteobacteria also show great similarity with MtrH;
- Note 4. A homolog to MMP1564 is also found in Dechloromonas aromatica RCB;
- Note 5. These 10 proteins are absent in the genome of Methanosphaera stadtmanae DSM 3091.
