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Table 3 List of Elements in the D. melanogaster genome

From: De novo identification of LTR retrotransposons in eukaryotic genomes

Cluster Family notation from previous work # of Intact LTRs (from previous work) Avg. Identity between LTRs (%) # of Solo LTRs
LTR_DM1 1731 4 (n/a, 1) 99.3 15
LTR_DM2 17.6 16 (6, 7) 99.5 29
LTR_DM3 297 38 (10, 18) 99.8 55
LTR_DM4 412 28 (18, 24) 99.8 16
LTR_DM5 bel 4 (n/a, 4) 99.6 13
LTR_DM6 blastopia 16 (6, 13) 100.0 4
LTR_DM7 blood 23 (21, 22) 99.8 16
LTR_DM8 burdock 13 (1, 7) 99.4 24
LTR_DM9 copia 30 (n/a, 26) 99.6 8
LTR_DM10 gypsy 8 (n/a, 1) 97.9 52
LTR_DM11 HMS beagle 17 (8, 9) 98.4 42
LTR_DM12 idefix 4 (n/a, 2) 98.7 69
LTR_DM13 mdg1 19 (4, 13) 99.9 23
LTR_DM14 mdg3 13 (8, 8) 99.2 16
LTR_DM15 micropia 3 (1, 2) 100.0 10
LTR_DM16 nomad 16 (4, 16) 99.9 23
LTR_DM17 roo 98 (40, 58) 99.7 96
LTR_DM18 springer 17 (n/a, 5) 99.3 75
LTR_DM19 stalker 25 (n/a, 3) 98.3 104
LTR_DM20 tirant 21 (6, 15) 99.8 32
LTR_DM21 transpac 5 (4, 5) 99.7 7
LTR_DM22 ZAM 3 (n/a, 0) 96.1 9
LTR_DM44   5 99.1 62
LTR_DM60   7 97.6 24
LTR_DM63   5 99.2 91
LTR_DM64   13 96.9 122
LTR_DM66   10 99.7 93
LTR_DM67   6 96.5 95
LTR_DM70   9 99.5 5
LTR_DM74   8 95.8 58
LTR_DM77   9 99.0 16
LTR_DM79   8 98.4 32
LTR_DM80   7 98.6 18
LTR_DM82   11 99.2 46
LTR_DM88   6 97.5 57
LTR_DM90   7 99.4 30
LTR_DM97   8 95.1 38
LTR_DM100   6 99.1 18
LTR_DM103   5 94.8 197
LTR_DM106   5 99.2 109
LTR_DM107   7 99.1 27
LTR_DM111   5 97.9 17