Skip to main content

Table 5 Golden Spike Probe Set Examples.

From: Fisher's combined p-value for detecting differentially expressed genes using Affymetrix expression arrays

      

Rank by Method

Probe Set

Ordered t-statistics

ANOVA

Combined P

Cyber-T

Median t

Moderated t

Original t

154940-at

-17.72

-13.75

-11.15

-5.34

-2.30

3513

1292

8596

1172

8515

7815

log2(FC) = 1.32

-0.38

2.15

4.14

4.68

7.2

      
 

8.34

9.16

12.57

15.11

       

146788-at

-3.58

-2.44

-2.43

-2.22

-1.31

8410

6012

8172

8337

8679

7217

log2(FC) = 0

-1.06

-0.82

-0.11

0.14

0.44

      
 

1.14

1.44

2.67

48.25

       

151862-at

-0.79

-0.21

-0.20

-0.12

0.03

2680

1173

2556

698

4030

5631

log2(FC) = 1.58

0.15

3.47

4.63

5.74

7.02

      
 

7.89

7.98

9.08

10.61

       

153041-at

-0.48

-0.32

0.66

0.76

0.87

1664

603

1155

1822

1815

2968

log2(FC) = 1.81

1.37

1.69

3.08

3.42

10.25

      
 

18.85

19.24

19.57

29.19

       
  1. This table shows the ordered probe level t-statistics and rankings by method for selected probe sets from the Golden Spike data.
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us