Table 1 Proteome sizes of 30 original fungal genomes and five test genomes (shown by asterisks)
From: A kingdom-specific protein domain HMM library for improved annotation of fungal genomes
i | 4-letter code | Genome | Sequences |
|---|---|---|---|
1 | Scer | Saccharomyces cerevisiae | 5823 |
2 | Spar | Saccharomyces paradoxus | 8564 |
3 | Smik | Saccharomyces mikatae | 11731 |
4 | Skud | Saccharomyces kudriavzevii | 3766 |
5 | Sbay | Saccharomyces bayanus | 13975 |
6 | Scas | Saccharomyces castellii | 4674 |
7 | Sglab | Candida glabrata | 5192 |
8 | Kwal | Kluyveromyces waltii | 5205 |
9 | Sklu | Saccharomyces kluyveri | 2963 |
10 | Egos | Eremothecium gossypii | 4723 |
11 | Klac | Kluyveromyces lactis | 5335 |
12 | Calb | Candida albicans | 14217 |
13 | Dhen | Debaryomyces hansenii | 6274 |
14 | Clus | Candida lusitaniae* | 5940 |
15 | Ylip | Yarrowia lipolytica | 6531 |
16 | Cimm | Coccidioides immitis* | 5940 |
17 | Anid | Aspergillus nidulans | 9523 |
18 | Afum | Aspergillus fumigatus | 9926 |
19 | Aory | Aspergillus oryzae* | 12062 |
20 | Anig | Aspergillus niger* | 14090 |
21 | Snod | Stagonospora nodorum | 16312 |
22 | Bcin | Botrytis cinerea | 9634 |
23 | Sscl | Sclerotinia sclerotiorum | 14145 |
24 | Gzea | Gibberella zeae | 11633 |
25 | Tree | Trichoderma reesei | 9783 |
26 | Ncra | Neurospora crassa | 9794 |
27 | Mgri | Magnaporthe grisea | 11082 |
28 | Cglob | Chaetomium globosum | 11046 |
29 | Spom | Schizosaccharomyces pombe | 4993 |
30 | Umay | Ustilago maydis | 6519 |
31 | Pchr | Phanerochaete chrysosporium | 10915 |
32 | Rory | Rhizopus oryzae* | 17298 |
33 | Ecun | Encephalitozoon cuniculi | 1996 |
34 | Pram | Phytophthora ramorum | 15876 |
35 | Psoj | Phytophthora sojae | 18986 |