From: Protein abundance profiling of the Escherichia coli cytosol
Attribute a | E. coli complete | Experimental cytosolic dataset | |||
---|---|---|---|---|---|
 | Proteins b | % Proteinsc | Proteinsb | % Proteinsc | % Abundance d |
TMS = 0 | 3202 | 75.66 | 940 | 89.5 | 97.6 |
TMS = 1 | 265 | 6.26 | 50 | 4.8 | 1.7 |
TMS = 2 | 117 | 2.76 | 10 | 1.0 | 0.2 |
TMS = 3 | 54 | 1.28 | 7 | 0.7 | 0.1 |
TMS = 4 | 82 | 1.94 | 7 | 0.7 | 6.2E-02 |
TMS = 5 | 61 | 1.44 | 5 | 0.5 | 2.9E-02 |
TMS = 6 | 81 | 1.91 | 5 | 0.5 | 4.0E-02 |
TMS = 7 | 30 | 0.71 | 1 | 0.1 | 1.1E-02 |
TMS = 8 | 52 | 1.23 | 3 | 0.3 | 2.6E-02 |
PSORT = Cytoplasmic (C) | 1574 | 36.51 | 554 | 52.8 | 65.3 |
PSORT = CytoplasmicMembrane (CM) | 851 | 19.74 | 93 | 8.9 | 1.2 |
PSORT = Periplasmic (P) | 142 | 3.29 | 61 | 5.8 | 1.6 |
PSORT = OuterMembrane (OM) | 91 | 2.11 | 25 | 2.4 | 2.3 |
PSORT = Extracellular (E) | 20 | 0.46 | 0 | 0.0 | Â |
PSORT = Unknown (U) | 1577 | 36.58 | 288 | 27.4 | 29.0 |
PSORT = Unknown (multiple sites) (UM) | 56 | 1.30 | 14 | 1.3 | 0.4 |
PSORT = C| CM | U | UM | 4058 | 94.13 | 949 | 90.4 | 95.9 |
PSORT = C | U | 3054 | 71.21 | 842 | 80.2 | 94.3 |
TMS = 0 & PSORT = C | 1253 | 29.21 | 548 | 52.2 | 65.1 |
TMS = 0 & PSORT = C | CM | 1903 | 44.37 | 580 | 55.3 | 65.7 |
TMS = 0 & PSORT = C | CM | U | 3111 | 72.53 | 843 | 80.3 | 94.3 |
TMS < = 1 & PSORT = C | 1335 | 31.13 | 553 | 52.7 | 65.3 |
TMS < = 1 & PSORT = C | CM | 2033 | 47.40 | 592 | 56.4 | 65.8 |
TMS < = 1 & PSORT = C | CM | U | 3334 | 77.73 | 877 | 83.5 | 94.8 |
TMS < = 1 & PSORT = C | U | 2636 | 61.46 | 838 | 79.8 | 94.3 |
EXP = C | 370 | 18.57 | 279 | 26.6 | 63.0 |
EXP = IM | 76 | 3.82 | 46 | 4.4 | 4.7 |
EXP = OM | 62 | 3.11 | 40 | 3.8 | 2.1 |
EXP = P | 60 | 3.01 | 43 | 4.1 | 1.7 |
TMS < = 1 & EXP = C | 281 | 6.55 | 279 | 26.6 | 63.0 |
TMS < = 1 & EXP = IM | 62 | 1.45 | 42 | 4.0 | 4.6 |
TMS < = 1 & EXP = OM | 44 | 1.03 | 36 | 3.4 | 2.0 |
TMS < = 1 & EXP = P | 48 | 1.12 | 43 | 4.1 | 1.7 |
TMS < = 1 & (PSORT = C|U | EXP = C) | 2655 | 61.90 | 853 | 81.2 | 94.6 |
(TMS < = 1 & PSORT = C|U) | EXP = C | 2680 | 62.49 | 853 | 81.2 | 94.6 |