Sequencing and analysis of the gene-rich space of cowpea

BMC Genomics

Table 2 Statistical data on cowpea genespace sequence reads (GSRs) and assemblies.

Total number of sequence attempts	298,848
Total number of successful sequences^a	263,425
Success rate	88.1%
Usable read length (nucleotides)
Minimum	100.0
Maximum	804.0
Mean	609.7
Median	644.0
Total Usable Bases	160,696,129
Number of Clusters	49,162
Number of GSR assemblies (contigs)	52,149
Number of singletons	70,679
Minimum Assembly Length (nucleotides)	64
Maximum Assembly Length (nucleotides)	23,920
Mean Assembly Length (nucleotides)	1,242
Median Assembly Length (nucleotides)	1,047
Total length of DNA represented by GSR assemblies and singletons	78,706,947
Number of GSR assemblies annotated by BLAST	23,372
Number of GSR singletons annotated by BLAST	19,881

^a Successful reads were greater than 100 bp in length and did not match DNA of extracellular (fungal, insect, bacterial or viral) and organellar (mitochondrion and chloroplast) origin when compared to available databases using blastx.

ISSN: 1471-2164