Reliability and applications of statistical methods based on oligonucleotide frequencies in bacterial and archaeal genomes

Table 2 P. aeruginosa compared to 581 genomic DNA sequences using ZOM, MCM and ROF measures

Name	Genbank	Size mbp	AT	2-ZOM	3-ZOM	4-ZOM	5-ZOM	6-ZOM	MCM	ROF
Pseudomonas aeruginosa strain PAO1	AE004091	6.26	0.33	1	1	1	1	1	1	1
Ralstonia metallidurans strain CH34, plasmid 1	CP000354	0.23	0.40	0.97	0.87	0.82	0.78	0.72	0.61	0.93
Xanthomonas campestris pv. vesicatoria strain 85-10, plasmid pXCV183	AM039951	0.18	0.40	0.97	0.87	0.84	0.80	0.74	0.76	0.93
Azoarcus sp. EbN1, plasmid 2	CR555308	0.22	0.37	0.96	0.89	0.87	0.84	0.80	0.85	0.95
Corynebacterium jeikeium strain K411	CR931997.1	2.46	0.39	0.95	0.91	0.88	0.84	0.81	0.79	0.95
Pseudomonas entomophila strain L48	CT573326.1	5.89	0.36	0.89	0.92	0.93	0.93	0.93	0.96	0.96
Pseudomonas fluorescens strain Pf-5	CP000076.1	7.07	0.37	0.85	0.88	0.90	0.90	0.90	0.95	0.94
Pseudomonas fluorescens strain PfO-1	CP000094.1	6.44	0.39	0.91	0.87	0.86	0.86	0.85	0.87	0.93
Ralstonia eutropha strain H16, chromosome 1	AM260479	4.05	0.34	0.92	0.90	0.90	0.90	0.88	0.90	0.97
Ralstonia solanacearum strain GMI1000	AL646052.1	3.72	0.33	0.93	0.90	0.90	0.89	0.88	0.92	0.96
Ralstonia eutropha strain JMP134	CP000091.1	3.81	0.35	0.92	0.90	0.89	0.88	0.87	0.88	0.95
Pseudomonas putida_strain KT2440	CP000712.1	6.18	0.38	0.82	0.85	0.86	0.87	0.86	0.90	0.92
Novosphingobium aromaticivorans strain DSM 12444	CP000248.1	3.56	0.35	0.93	0.91	0.88	0.86	0.84	0.80	0.95

ISSN: 1471-2164