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Table 3 Top three genes highly expressed in each library

From: Annotated ESTs from various tissues of the brown planthopper Nilaparvata lugens: A genomic resource for studying agricultural pests

Library

Representative clone

No. of EST

Annotation

AA+AB

AA0013

32

gi|154799937|dbj|BAF75351.1| vitellogenin [Nilaparvata lugens] 352 1e-95

 

AA0016

16

gi|90819992|gb|ABD98753.1| putative ADP/ATP translocase [Grap.. 261 4e-72

 

AA1208

15

gi|51988476|gb|AAU20854.1| actin [Reticulitermes flavipes] 338 9e-92

AC+AD

AC1062

17

gi|110456520|gb|ABG74719.1| putative actin [Diaphorina citri] 421 e-116

 

AC0157

11

n.h.

 

AC0155

10

gi|50428904|gb|AAT77152.1| arginine kinase [Periplaneta america.. 285 6e-76

 

AC0302

10

n.h.

 

AC0779

10

gi|60678801|gb|AAX33735.1| MPA13 allergen [Periplaneta americ.. 198 3e-49

EA

EA0377

38

n.h.

 

EA0026

36

n.h.

 

EA0111

33

n.h.

 

EA0258

16

gi|4504279|ref|NP_002098.1| H3 histone, family 3A [Homo sapiens] 263 1e-68

 

EA0320

16

gi|124805775|ref|XP_001350534.1| eukaryotic translation initiatiati.. 115 1e-24

 

EA0331

16

n.h.

EB

EB0055

91

n.h.

 

EB0302

71

n.h.

 

EB0169

54

gi|91078856|ref|XP_972007.1| PREDICTED: similar to 60S riboso.. 161 1e-38

HA

HA0029

54

gi|70909775|emb|CAJ17313.1| ribosomal protein L23Ae [Georissu.. 234 2e-60

 

HA0105

44

n.h.

 

HA0046

32

n.h. (homologous to rhodopsin)

HT

HT0003

223

gi|156640546|gb|ABU92560.1| actin [Monochamus alternatus] 171 2e-41

 

HT0037

55

gi|56684881|gb|AAW22542.1| myosin light chain [Gryllotalpa orien.. 273 5e-72

 

HT0065

52

gi|146229728|gb|ABQ12293.1| unknown [Antheraea pernyi nucleop.. 75 2e-12

MA

MA0011

371

n.h.

 

MA0160

158

n.h. (homologous to trypsin-like protease)

 

MA0065

108

n.h.

MB

MB0025

184

n.h.

 

MB0037

91

n.h. (homologous to trypsin-like protease)

 

MB0028

59

n.h.

NA

NA0013

130

gi|158286709|ref|XP_001688118.1| cuticular protein 140, RR-2 fa.. 101 3e-20

 

NA0139

52

gi|46561736|gb|AAT01073.1| putative muscle actin [Homalodisca c.. 545 e-153

 

NA1558

38

gi|158286709|ref|XP_001688118.1| cuticular protein 140, RR-2 fam.. 75 4e-12

NB

NB0017

87

n.h.

 

NB0039

74

gi|91091510|ref|XP_969238.1| PREDICTED: similar to 60S riboso.. 373 e-102

 

NB0029

62

gi|70909551|emb|CAJ17197.1| ribosomal protein S3e [Scarabaeus.. 407 e-112

OA

OA0030

13

gi|110671482|gb|ABG81992.1| putative ribosomal protein S2 [Diap.. 164 2e-39

 

OA0079

12

gi|157767586|ref|XP_001667273.1| Hypothetical protein CBG1604.. 79 7e-14 (ovary-specifically expressed OC2756 in Table 4)

 

OA0009

11

gi|155966151|gb|ABU41030.1| hypothetical protein [Lepeophtheirus.. 89 2e-16

OB+OC

OB0024

210

gi|157767586|ref|XP_001667273.1| Hypothetical protein CBG16043.. 82 2e-14 (ovary-specifically expressed OC2756 in Table 4)

 

OB0360

118

gi|93102305|dbj|BAE93436.1| shematrin-4 [Pinctada fucata] 97 7e-19 (ovary-specifically expressed OC0606 in Table 4)

 

OB0055

40

gi|82470775|gb|AAL87229.3|AF480890_1 metacaspase [Acantham.. 88 4e-16

SG

SG0085

490

gi|46360158|gb|AAS88902.1| mucin-like protein [Laodelphax striat... 222 2e-56

 

SG0019

108

gi|154799937|dbj|BAF75351.1| vitellogenin [Nilaparvata lugens] 404 e-111

 

SG0023

107

gi|6523547|emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-.. 110 4e-23

 

SG0076

107

n.h.

TA

TA0775

19

n.h. (testis-specifically expressed NB3697 in Table 5)

 

TA0186

15

n.h.

 

TA0012

12

n.h. (testis-specifically expressed AD1216 in Table 5)

 

TA0118

12

gi|66525050|ref|XP_625145.1| PREDICTED: similar to tubulin, alph.. 285 1e-75

 

TA0428

12

gi|110755210|ref|XP_393150.3| PREDICTED: similar to dumpy CG.. 71 6e-11

TH

TH0004

402

gi|51988476|gb|AAU20854.1| actin [Reticulitermes flavipes] 469 e-130

 

TH0054

117

gi|17933672|ref|NP_524586.1| Myosin LC2 [Drosophila melanogas.. 221 5e-56

 

TH0020

62

gi|154799937|dbj|BAF75351.1| vitellogenin [Nilaparvata lugens] 395 e-108

  1. Representative clones are shown by an EST number in the cluster. "n.h." denotes no homology. HA0046 showed no homology, but other members of the cluster showed homology to rhodopsin. Other cluster members of MA0160 and MB0037 showed homology to trypsin-like protease.
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BMC Genomics

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