Salmon louse (Lepeophtheirus salmonis) transcriptomes during post molting maturation and egg production, revealed using EST-sequencing and microarray analysis

Eichner, Christiane; Frost, Petter; Dysvik, Bjarte; Jonassen, Inge; Kristiansen, Bjørn; Nilsen, Frank

doi:10.1186/1471-2164-9-126

Table 3 Sequence identity analyses of L.salmonis proteins with homologous proteins in crustaceans, insects, fish and humans

From: Salmon louse (Lepeophtheirus salmonis) transcriptomes during post molting maturation and egg production, revealed using EST-sequencing and microarray analysis

Contig no.	Annotation	No AA	Crustaceans	Aedes aegypti	Drosophila melanogaster	Anopheles gambiae	Danio rerio	Homo sapiens
Contig 504	Actin	376	95	96	96	96	95	95
Contig 15	40S ribosomal protein S13	151	85	80	79	80	84	87
Contig 20	60S ribosomal protein L5	296	67	68	67	66	66	68
Contig 211	Glyceraldehyde-3-phosphate dehydrogenase	332	76	74	74	76	76	75
Contig 222	QM protein	219	81	78	81	79	77	77
Contig 233	60S ribosomal protein L7A	266	69	66	64	60	68	68
Contig 286	translation initiation factor 4A2 isoform 2	413	71	69	69	69	72	73
Contig 307	glucosamine-6-phosphate isomerase	268	70	72	71	71	69	70
Contig 340	elongation factor 1-alpha	459	71	76	77	76	74	74
Contig 392	receptor for activated protein kinase C-like	316	85	79	80	78	78	78
Contig 468	14-3-3-like protein (Leonardo protein)	252	80	83	85	82	81	79
Contig 73	Adenosylhomocysteinase	411	76	73	73	73	73	73
Contig 81	S5e ribosomal protein	213	84	83	81	77	89	84
Contig 83b	phospholipid-hydroperoxide glutathione peroxidase	182	65	54	42	46	59	52
Contig 109	Adenosine kinase (AK)	332	38	50	45	44	50	51
Contig 192	Calmodulin (CaM)	149	100	100	100	100	97	97
Contig 229	Cystathionine-beta-synthase	381	58	54	52	52	59	57
Contig 264	histone H4	103	100	100	100	100	99	99
Contig 325	ER protein disulfide isomerase	401	56	55	53	53	42	52
Contig 363	Enolase	290	76	76	76	76	74	74
Contig 28	serine-type enodpeptidase (trypsin-lik)	226	38	37	34	35	32	28
Contig 29	metalloproteinase	322	35	38	36	38	37	31
Contig 56	serine protease	254	31	31	30	34	29	25
Contig 88	cathepsin L	312	54	51	51	50	50	49
Contig 193	cysteine protease (cathepsin)	372	31	31	32	31	33	33
Contig 434	carboxypeptidase	241	40	29	33	30	26	27
Contig 131	heat shock protein 70	335	69	76	75	76	79	78
Mean			66.7	65.9	65.0	64.7	65.5	65.0

Back to article page

ISSN: 1471-2164

Contact us

Submission enquiries: bmcgenomics@biomedcentral.com
General enquiries: ORSupport@springernature.com

BMC Genomics

Contact us