Table 4 Mycobacterial isolates used in this study.
From: Comparative genomic analysis of Mycobacterium avium subspecies obtained from multiple host species
| Â | Â | Â | SSR Type | Â | Â | Â | Â | Â | |
|---|---|---|---|---|---|---|---|---|---|
Isolate | Organisma | Host | G-rep | GGT-rep | IS1311 type | hsp65 PstI digest | Mycobactin J dependency | Source | Genomotypeb |
7926 | MAP | Armadillo | 7 | 4 | cattle | undigested | YES | UMNc | Cattle |
7288 | MAP | Bison | 7 | 5 | bison | undigested | YES | UMN | Cattle |
7297 | MAP | Bison | 7 | 4 | bison | undigested | YES | UMN | Cattle |
7560 | MAP | Bison | 7 | 4 | bison | undigested | YES | UMN | Cattle |
7876 | MAP | Cat | 14 | 5 | cattle | undigested | YES | UMN | Cattle |
1018 | MAP | Cattle | 7 | 4 | cattle | undigested | YES | UMN | Cattle |
6052 | MAP | Cattle | Â | Â | Â | Â | YES | UMN | Cattle |
6054 | MAP | Cattle | Â | Â | Â | Â | YES | UMN | Cattle |
6057 | MAP | Cattle | Â | Â | Â | Â | YES | UMN | Cattle |
7265 | MAP | Cattle | 10 | 5 | cattle | undigested | YES | ATCC 19815 | Hominissuis |
7301 | MAP | Cattle | 11 | 5 | cattle | undigested | YES | UMN | Hominissuis |
7935 | MAP | Cattle | 14 | 5 | cattle | undigested | YES | UMN | Cattle |
4026 | MAP | Goat | 10 | 5 | cattle | undigested | YES | UMN | Cattle |
4054 | MAP | Goat | 7 | 5 | cattle | undigested | YES | UMN | Cattle |
4137 | MAP | Goat | 12 | 5 | cattle | undigested | YES | UMN | Cattle |
7896 | MAP | Human | Â | Â | cattle | undigested | YES | ATCC 43545 | Cattle |
BEN | MAP | Human | 7 | 4 | cattle | undigested | YES | ATCC 43544 | Cattle |
HOLLAND | MAP | Human | 7 | 4 | cattle | undigested | YES | ATCC 49164 | Cattle |
LINDA | MAP | Human | 7 | 5 | cattle | undigested | YES | ATCC 43015 | Cattle |
MAH104 | MAH | Human | Â | Â | avium | Â | NO | NADCd | Hominissuis |
MAP3 | MAP | Human | 7 | 5 | cattle | undigested | Â | UMN | Cattle |
MAP4 | MAP | Human | 7 | 4 | cattle | undigested | YES | UMN | Cattle |
MAP5 | MAP | Human | 7 | 5 | cattle | undigested | Â | UMN | Cattle |
MAP6 | MAP | Human | 7 | 5 | cattle | undigested | YES | UMN | Cattle |
MAP7 | MAP | Human | 7 | 5 | cattle | undigested | Â | UMN | Cattle |
397 | MAP | Sheep | Â | Â | sheep | Â | YES | NADC | Sheep |
467 | MAP | Sheep | Â | Â | sheep | Â | YES | NADC | Sheep |
5001 | MAP | Sheep | 2GC4G | 3 | sheep | digested | YES | UMN | Avium-silvaticum |
7565 | MAP | Sheep | 15 | 3 | sheep | undigested | YES | UMN | Sheep |
9034 | MAP | Sheep | Â | Â | sheep | undigested | Â | UMN | Hominissuis |
9040 | MAP | Sheep | Â | Â | sheep | undigested | Â | UMN | Sheep |
7887 | MAP | Starling | 15 | 5 | cattle | undigested | YES | UMN | Cattle |
7889 | MAP | Starling | 7 | 5 | cattle | undigested | YES | UMN | Cattle |
7890 | MAP | Starling | 13 | 5 | cattle | undigested | YES | UMN | Cattle |
7893 | MAP | Starling | 12 | 5 | cattle | undigested | YES | UMN | Cattle |
6071 | MAA | Strain 18 | Â | Â | Â | Â | NO | NADC | Avium-silvaticum |
8744 | MAA | Strain 18 | 2GC4G | 3 | Â | Â | Â | UMN | Avium-silvaticum |
8743A | MAA | Strain 18 | 2GC4G | 3 | Â | Â | Â | UMN | Avium-silvaticum |
8744A | MAA | Strain 18 | 2GC4G | 3 | Â | Â | Â | UMN | Avium-silvaticum |
6006 | MAS | Pigeon | Â | Â | avium | Â | NO | NADC | Avium-silvaticum |
6007 | MAS | Pigeon | Â | Â | Â | Â | NO | NADC | Avium-silvaticum |
6049 | MAS | Pigeon | Â | Â | Â | Â | NO | NADC | Avium-silvaticum |
6058 | MAS | Pigeon | Â | Â | avium | Â | NO | NADC | Avium-silvaticum |
ATCC49884 | MAS | Pigeon | Â | Â | Â | Â | NO | ATCC 49884 | Avium-silvaticum |
ATCC25291 | MAA | Chicken | Â | Â | Â | Â | NO | ATCC 25291 | Avium-silvaticum |
ATCC35719 | MAA | Chicken | Â | Â | Â | Â | NO | ATCC 35719 | Avium-silvaticum |
5835cc | MAA | Duck | Â | Â | Â | Â | Â | NADC | Hominissuis |
5836cc | MAA | Duck | Â | Â | Â | Â | Â | NADC | Hominissuis |