Table 5 Shortest path length in the regulatory network.
From: Topological comparison of methods for predicting transcriptional cooperativity in yeast
|  | CTFPs | Co-functional TF pairs | Co-regulatory TF pairs | Co-functional ∩ co-regulatory TF pairs | Random TF pairs | ||||
|---|---|---|---|---|---|---|---|---|---|
Method | Mean | Mean | p-value | Mean | p-value | Mean | p-value | Mean | p-value |
Method N | 3.731 | 3.970 | 5.196·10 -1 | 3.292 | 4.162·10 -1 | 5.000 | 4.779·10 -1 | 4.380 | 1.304·10 -1 |
Method B | 3.500 | 3.970 | 3.498·10 -1 | 3.292 | 4.123·10 -1 | 5.000 | 5.483·10 -1 | 4.380 | 6.550·10 -2 |
Method T | 2.846 | 3.970 | 5.882·10 -2 | 3.292 | 4.878·10 -1 | 5.000 | 1.641·10 -1 | 4.380 | 1.246·10 -2 |
Method C | 3.258 | 3.970 | 7.551·10 -2 | 3.292 | 9.632·10 -1 | 5.000 | 2.659·10 -1 | 4.380 | 5.292·10-3 |