Skip to main content

Table 4 ES114 genes encoding transcriptional machinery.

From: Comparative genomics-based investigation of resequencing targets in Vibrio fischeri: Focus on point miscalls and artefactual expansions

Locus_tag

Gene

Product

Notes

RNA polymerase core

VF_0262

rpoA

α subunit

 

VF_2414

rpoB

β subunit

 

VF_2412

rpoC

β' subunit

 

VF_0105

rpoZ

ω subunit

 

Sigma subunits (11 predicted)

VF_2254

rpoD

σD/σ70

Group 1: σ70-type

VF_2067

rpoS

σS

Group 2: σ70-type, σ38-subtype

VF_A1015

rpoQ

σQ

Group 2: σ70-type, σ38-subtype

VF_2450

rpoH

σH

Group 3: σ70-type, σ32-subtype

VF_1834

fliA

σF

Group 3: σ70-type, σ28-subtype

VF_2093

rpoE

σE

Group 4: σ70-type, σ24-subtype

VF_0972

rpoE2

σE2

Group 4: σ70-type, σ24-subtype

VF_A0820

rpoE3

σE3

Group 4: σ70-type, σ24-subtype

VF_A0766

rpoE4

σE4

Group 4: σ70-type, σ24-subtype

VF_2498

rpoE5

σE5

Group 4: σ70-type, σ24-subtype

VF_0387

rpoN

σN

σ54-type