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Table 2 Experimental candidates with corresponding E-transcript proportions based on EST and experimental data. EST ratios are given as absolute EST counts. Column 'predicted' lists the E-transcript proportions obtained from the sequence-based prediction. Grey shaded values mark the cases where NAGNAG alternative splicing was validated (avg [minor isoform in organs, seedlings] > 2× avg [error]). At4g35785 is lacking EST data. Therefore, an EST-based E-transcript frequency cannot be shown and is indicated by '-'.

From: Alternative splicing at NAGNAG acceptors in Arabidopsis thaliana SR and SR-related protein-coding genes

  E-transcript (%)
Gene EST Predicted Experiments
RS41 23 7 16.7 ± 0.6
SR33/SCL33 0 48 29.9 ± 0.7
SR45i7 0 48 0.6 ± 0.5
SR45i9 0 7 0.4 ± 0.6
SRZ22a 100 98 99.5 ± 0.6
CID8 100 97 99.1 ± 0.5
At1g76940 100 81 98.8 ± 0.9
At2g24350 0 7 3.2 ± 1.5
ATRZ-1A 100 83 98.9 ± 1.4
At3g54230 0 25 2.3 ± 0.5
At4g35785 -* 98 97.4 ± 0.3
At5g09880 100 98 99.0 ± 0.7
At5g59950 0 7 2.8 ± 0.4
U11–35K 0 17 8.5 ± 0.9
U2AF65 0 17 5.8 ± 0.6